RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SONP18583 2426 aaKnown RBP8.38□□□□□ -1.07
PALB2-201ENST00000261584 TRAV8-1A0A0A6YYK1 113 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 CD99P14209 185 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 IGFBPL1Q8WX77 278 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 SPSB4Q96A44 273 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 P01737 135 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 NMUP48645 174 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 ZFP36L1Q07352 338 aaKnown RBP8.38□□□□□ -1.07
PALB2-201ENST00000261584 TMEM177Q53S58 311 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 RNFT1Q5M7Z0 435 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 Q6P435 159 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 FA2HQ7L5A8 372 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 FAM208BQ5VWN6 2430 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 ADAMTS9Q9P2N4 1935 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 TRBV20OR9-2A0A075B6H5 130 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 M0QZK8 103 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 GGCTO75223 188 aaKnown RBP8.38□□□□□ -1.07
PALB2-201ENST00000261584 ZNF738Q8NE65 137 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 PKIBQ9C010 78 aa8.38□□□□□ -1.07
PALB2-201ENST00000261584 HIGD1CA8MV81 97 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 K7ESF4 209 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 C3orf79P0CE67 100 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 LGALS4P56470 323 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 HSPE1P61604 102 aaKnown RBP8.37□□□□□ -1.07
PALB2-201ENST00000261584 WDR82Q6UXN9 313 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 FAM214BQ7L5A3 538 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 C1orf210Q8IVY1 113 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 DEFB124Q8NES8 71 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 C18orf15Q96N68 181 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 TMEM167BQ9NRX6 74 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 WDR83OSQ9Y284 106 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 DCHS1Q96JQ0 3298 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 CORTO00230 105 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 SCGB2A2Q13296 93 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 DEFB123Q8N688 67 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 OR4B1Q8NGF8 309 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 TRAV1-1A0A0B4J248 108 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 A0A1B0GW64 132 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 MLNRO43193 412 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 IGKV1-16P04430 117 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 CT45A6P0DMU7 189 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 CT45A5P0DMU8 189 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 CT45A7P0DMV0 189 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 LCN2P80188 198 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 COTL1Q14019 142 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 CT45A1Q5HYN5 189 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 UTF1Q5T230 341 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 WDR73Q6P4I2 378 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 Q6ZR03 302 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 CT45A3Q8NHU0 189 aa8.37□□□□□ -1.07
PALB2-201ENST00000261584 SAA2-SAA4A0A096LPE2 208 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 C9orf172C9J069 976 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 LEPROTL1O95214 131 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 VENTXO95231 258 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 IGLV3-1P01715 115 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 SAA2P0DJI9 122 aaPredicted RBP8.36□□□□□ -1.07
PALB2-201ENST00000261584 DUTP33316 252 aaKnown RBP8.36□□□□□ -1.07
PALB2-201ENST00000261584 CA7P43166 264 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 GFRA1P56159 465 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 AARDQ4LEZ3 155 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 SAXO1Q8IYX7 474 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 PCED1AQ9H1Q7 454 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 SPRR3Q9UBC9 169 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 ANKHD1Q8IWZ3 2542 aaKnown RBP8.36□□□□□ -1.07
PALB2-201ENST00000261584 IGHV3-23P01764 117 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 LDLRAD2Q5SZI1 272 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 ZNF295-AS1Q8N0V1 137 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 CD177Q8N6Q3 437 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 STPG4Q8N801 248 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 ASCL3Q9NQ33 180 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 TIMM9Q9Y5J7 89 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 LOC400499M0QZD8 3231 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 FAM90A26D6RGX4 464 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 PPIAL4DF5H284 164 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 ADH4P08319 380 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 RIPPLY3P57055 190 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 BPIFB3P59826 476 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 LBHQ53QV2 105 aaPredicted RBP8.36□□□□□ -1.07
PALB2-201ENST00000261584 SFTA2Q6UW10 78 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 FDCSPQ8NFU4 85 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 FAM168AQ92567 244 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 SARAFQ96BY9 339 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 TMEM242Q9NWH2 141 aa8.36□□□□□ -1.07
PALB2-201ENST00000261584 LOC102723996A0A087X1L8 192 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 FAM27E3Q08E93 113 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 ASCL4Q6XD76 172 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 GOLT1AQ6ZVE7 132 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 PTPRQQ9UMZ3 2332 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 IGHV3-49A0A0A0MS15 119 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 LY6G6EA0A0G2JKS1 128 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 OR4C46A6NHA9 309 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 MGST3O14880 152 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 RPL11P62913 178 aaKnown RBP8.35□□□□□ -1.07
PALB2-201ENST00000261584 U3KQA8 63 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 NCBP2LA6PVI3 153 aaKnown RBP8.35□□□□□ -1.07
PALB2-201ENST00000261584 C8orf88P0DMB2 117 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 CT45A10P0DMU9 189 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 MPV17L2Q567V2 206 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 SLC35E4Q6ICL7 350 aa8.35□□□□□ -1.07
PALB2-201ENST00000261584 LINC00305Q7Z4B0 112 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms