RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 OR4F17Q8NGA8 305 aa8.85□□□□□ -0.99
CHRNA1-201ENST00000261007 OR8B3Q8NGG8 313 aa8.85□□□□□ -0.99
CHRNA1-201ENST00000261007 OR13A1Q8NGR1 328 aa8.85□□□□□ -0.99
CHRNA1-201ENST00000261007 C1orf159Q96HA4 380 aa8.85□□□□□ -0.99
CHRNA1-201ENST00000261007 OR8B2Q96RD0 313 aa8.85□□□□□ -0.99
CHRNA1-201ENST00000261007 COMMD5Q9GZQ3 224 aa8.85□□□□□ -0.99
CHRNA1-201ENST00000261007 SEPSECSQ9HD40 501 aaKnown RBP8.85□□□□□ -0.99
CHRNA1-201ENST00000261007 CD40P25942 277 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 DUTP33316 252 aaKnown RBP8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 PQLC2Q6ZP29 291 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 SMIM15Q7Z3B0 74 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 GCSAMQ8N6F7 178 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 STPG3Q8N7X2 389 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 C18orf32Q8TCD1 76 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 FAM222BQ8WU58 562 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 ZNF331Q9NQX6 463 aaPredicted RBP8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 IGKV1D-17A0A075B6S4 117 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 TRAV34A0A0B4J273 112 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 C16orf97H3BN30 126 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 KIR2DS2P43631 304 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 PRR20EP86478 221 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 PRR20CP86479 221 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 PRR20DP86480 221 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 PRR20BP86481 221 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 PRR20AP86496 221 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 FAM162BQ5T6X4 162 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 PRAMEF5Q5TYX0 476 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 MOGAT3Q86VF5 341 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 RPRMLQ8N4K4 120 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 Q8TCH9 128 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 ABHD17AQ96GS6 310 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 FAM234AQ9H0X4 552 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 C1RLQ9NZP8 487 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 RNF7Q9UBF6 113 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 METRNQ9UJH8 293 aa8.84□□□□□ -0.99
CHRNA1-201ENST00000261007 EP300Q09472 2414 aaPredicted RBP8.84□□□□□ -1
CHRNA1-201ENST00000261007 FAM181BA6NEQ2 426 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 VSTM5A8MXK1 200 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 K7EM74 188 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 F2RL2O00254 374 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 SPRY3O43610 288 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 FOXH1O75593 365 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 USF1P22415 310 aaPredicted RBP8.83□□□□□ -1
CHRNA1-201ENST00000261007 CRYBB3P26998 211 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 SSTR5P35346 364 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 PPOXP50336 477 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 TNFAIP6P98066 277 aaPredicted RBP8.83□□□□□ -1
CHRNA1-201ENST00000261007 RBPJQ06330 500 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 EDDM3AQ14507 147 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 IBA57Q5T440 356 aaKnown RBP8.83□□□□□ -1
CHRNA1-201ENST00000261007 SPATA31B1PQ5VZV4 182 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 ITLN1Q8WWA0 313 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 SSMEM1Q8WWF3 244 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 C19orf24Q9BVV8 132 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 RNASE7Q9H1E1 156 aaKnown RBP8.83□□□□□ -1
CHRNA1-201ENST00000261007 GNG12Q9UBI6 72 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 MUC3AQ02505 3323 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 CFAP54Q96N23 3096 aa8.83□□□□□ -1
CHRNA1-201ENST00000261007 SPINK4O60575 86 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 HSBP1O75506 76 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 IGLV2-8P01709 118 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 NTF3P20783 257 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 GPR12P47775 334 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 ERVK-16P61578 105 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 UBE2G1P62253 170 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 RELBQ01201 579 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 VHLLQ6RSH7 139 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 GFRALQ6UXV0 394 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 DOLPP1Q86YN1 238 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.82□□□□□ -1
CHRNA1-201ENST00000261007 TECRQ9NZ01 308 aaKnown RBP8.82□□□□□ -1
CHRNA1-201ENST00000261007 ZNF835Q9Y2P0 537 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 HEATR1Q9H583 2144 aaKnown RBP8.82□□□□□ -1
CHRNA1-201ENST00000261007 K7ENP7 123 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 OR2J3O76001 311 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 IGLL1P15814 213 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 TNFRSF1AP19438 455 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 REG1BP48304 166 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 FAM27E3Q08E93 113 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 TNXAQ16473 311 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 ALKBH2Q6NS38 261 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 MRPL54Q6P161 138 aaKnown RBP8.82□□□□□ -1
CHRNA1-201ENST00000261007 FAM231DQ6ZW35 169 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 ASCL5Q7RTU5 278 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 SPACA3Q8IXA5 215 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 ABHD12Q8N2K0 398 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 IGF2BP2-AS1Q96M15 143 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 SAP30LQ9HAJ7 183 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 ST20Q9HBF5 79 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 PSG11Q9UQ72 335 aa8.82□□□□□ -1
CHRNA1-201ENST00000261007 A0A0G2JNJ9 132 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 A0A1W2PRE2 83 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 C2orf70A6NJV1 201 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 J3QR06 171 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 M0R2Z0 102 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 IGHV1-46P01743 117 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 NPY1RP25929 384 aa8.81□□□□□ -1
CHRNA1-201ENST00000261007 PSG5Q15238 335 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms