RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ZNF718Q3SXZ3 478 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 OSR2Q8N2R0 312 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 MORN4Q8NDC4 146 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM54Q969K7 222 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 SPACA5Q96QH8 159 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 ACYP1P07311 99 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 FOLR3P41439 243 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 TEX36Q5VZQ5 186 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 C1orf210Q8IVY1 113 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 RND1Q92730 232 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 DNAJB12Q9NXW2 375 aaKnown RBP5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 CKS2P33552 79 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 CXorf66Q5JRM2 361 aaPredicted RBP5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM78Q5T7P6 136 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEFF1Q8IYR6 380 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 OTOSQ8NHW6 89 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 PGLYRP4Q96LB8 373 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 FOXA2Q9Y261 457 aaPredicted RBP5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 RAXQ9Y2V3 346 aa5.67□□□□□ -1.5
PDGFRA-201ENST00000257290 RBMY1BA6NDE4 496 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 RBMY1EA6NEQ0 496 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 HBDP02042 147 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 RBP4P02753 201 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 RBMY1DP0C7P1 496 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 RBMY1A1P0DJD3 496 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 RBMY1CP0DJD4 496 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 GATA2P23769 480 aaPredicted RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 HIST1H4AP62805 103 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 PSG7Q13046 419 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 RBMY1FQ15415 496 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 UTF1Q5T230 341 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 SLC48A1Q6P1K1 146 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 OR10AC1Q8NH08 325 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 SLC25A20O43772 301 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 IGKCP01834 107 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 CEND1Q8N111 149 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 NABP1Q96AH0 204 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 GNG12Q9UBI6 72 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 TRBV5-5A0A0J9YX44 114 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 LGALS1P09382 135 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 RRN3P1Q2M238 152 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 PBOV1Q9GZY1 135 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 ZNFX1Q9P2E3 1918 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 DENND4AQ7Z401 1863 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 WIPF1O43516 503 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 LDB3O75112 727 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 MYF5P13349 255 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 ZFP36L2P47974 494 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 TBR1Q16650 682 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 ATP5L2Q7Z4Y8 100 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 FOXC2Q99958 501 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 TCF19Q9Y242 345 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 BRCA1P38398 1863 aaKnown RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 RALGAPA2Q2PPJ7 1873 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 IGLC6P0CF74 106 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 Q6AWC8 147 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 SPEM1Q8N4L4 309 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 ZNF645Q8N7E2 425 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 C11orf44Q8N8P7 122 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 FAM57AQ8TBR7 257 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 S1PR5Q9H228 398 aa5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 CHCHD2Q9Y6H1 151 aaPredicted RBP5.66□□□□□ -1.5
PDGFRA-201ENST00000257290 MCM3APO60318 1980 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 IGLL5B9A064 214 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 ZIC4Q8N9L1 334 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 TMEM222Q9H0R3 208 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 TRPM7Q96QT4 1865 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 SPSB3Q6PJ21 355 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 Q71RC1 249 aaPredicted RBP5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 VKORC1L1Q8N0U8 176 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 ZNF740Q8NDX6 193 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 IFI27L1Q96BM0 104 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 GLIPR2Q9H4G4 154 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 METTL12A8MUP2 240 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 PIN1P1O15428 100 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 DAD1P61803 113 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 SMCHD1A6NHR9 2005 aa5.65□□□□□ -1.5
PDGFRA-201ENST00000257290 NNATQ16517 81 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 C6orf226Q5I0X4 101 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 DEFB123Q8N688 67 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 PRORYQ9H606 182 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 RHODO00212 210 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 VSIG8P0DPA2 414 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 COX6A1P12074 109 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 CX3CL1P78423 397 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 FAM219BQ5XKK7 198 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 OR11H6Q8NGC7 330 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 RNF115Q9Y4L5 304 aa5.65□□□□□ -1.51
PDGFRA-201ENST00000257290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 LILRA5A6NI73 299 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 PRSS2P07478 247 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 LGALS4P56470 323 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 DRAM1Q8N682 238 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 WFDC11Q8NEX6 87 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 RASL10BQ96S79 203 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 M0R2P5 195 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 ARL14EPLP0DKL9 152 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 PFN2P35080 140 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 FAM166AQ6J272 317 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 OCC1Q8TAD7 63 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms