RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 LINC00322Q6ZN03 302 aaPredicted RBP10.42□□□□□ -0.74
DDX39A-201ENST00000242776 RPP25LQ8N5L8 163 aaKnown RBP10.42□□□□□ -0.74
DDX39A-201ENST00000242776 MED28Q9H204 178 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 FKBP11Q9NYL4 201 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 CACFD1Q9UGQ2 172 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 PRNDQ9UKY0 176 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 A0A1B0GU03 582 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 UPK2O00526 184 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 CNIH1O95406 144 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 OR9G9P0C7N8 305 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 P0C879 139 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 SULT1A3P0DMM9 295 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 SULT1A4P0DMN0 295 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 SLC25A6P12236 298 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 RPL8P62917 257 aaKnown RBP10.42□□□□□ -0.74
DDX39A-201ENST00000242776 PRSS8Q16651 343 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 NMSQ5H8A3 153 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 GGNBP1Q5YKI7 109 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 ZNF562Q6V9R5 426 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 Q6ZNX1 250 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 PDCD10Q9BUL8 212 aa10.42□□□□□ -0.74
DDX39A-201ENST00000242776 PEF1Q9UBV8 284 aaKnown RBP10.42□□□□□ -0.74
DDX39A-201ENST00000242776 C15orf61A6NNL5 157 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 GOSR2O14653 212 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 ADAP1O75689 374 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 IL6RP08887 468 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-201ENST00000242776 HLA-GP17693 338 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 SMCO1Q147U7 214 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 TNXAQ16473 311 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 GUCA2BQ16661 112 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 CD300EQ496F6 205 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-201ENST00000242776 GSG1LQ6UXU4 331 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 GPR146Q96CH1 333 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 COMMD5Q9GZQ3 224 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 ZNF430Q9H8G1 570 aaPredicted RBP10.41□□□□□ -0.74
DDX39A-201ENST00000242776 COA4Q9NYJ1 87 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 CACNG5Q9UF02 275 aa10.41□□□□□ -0.74
DDX39A-201ENST00000242776 KMT2AQ03164 3969 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 A0A0G2JLM5 398 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 A0A0G2JRQ6 117 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 C5orf51A6NDU8 294 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 FAM25EA8MYX2 175 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 OR11H12B2RN74 326 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 EDN2P20800 178 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 OR2B8PP59922 312 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 OR1S1Q8NH92 325 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 DYNLRB2Q8TF09 96 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.4□□□□□ -0.74
DDX39A-201ENST00000242776 MGAT4CQ9UBM8 478 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 NSG2Q9Y328 171 aa10.4□□□□□ -0.74
DDX39A-201ENST00000242776 TRAV3A0A0B4J244 114 aa10.39□□□□□ -0.75
DDX39A-201ENST00000242776 CCSO14618 274 aa10.39□□□□□ -0.75
DDX39A-201ENST00000242776 DEDDO75618 318 aa10.39□□□□□ -0.75
DDX39A-201ENST00000242776 RPL27AP46776 148 aaKnown RBP10.39□□□□□ -0.75
DDX39A-201ENST00000242776 RRAS2P62070 204 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-201ENST00000242776 IAH1Q2TAA2 248 aaPredicted RBP10.39□□□□□ -0.75
DDX39A-201ENST00000242776 OR1L8Q8NGR8 309 aa10.39□□□□□ -0.75
DDX39A-201ENST00000242776 OR5B3Q8NH48 314 aa10.39□□□□□ -0.75
DDX39A-201ENST00000242776 TMEM14BQ9NUH8 114 aa10.39□□□□□ -0.75
DDX39A-201ENST00000242776 ZNF257Q9Y2Q1 563 aa10.39□□□□□ -0.75
DDX39A-201ENST00000242776 OR51B2Q9Y5P1 312 aa10.39□□□□□ -0.75
DDX39A-201ENST00000242776 ZNF785A8K8V0 405 aa10.38□□□□□ -0.75
DDX39A-201ENST00000242776 IZUMO4Q1ZYL8 232 aa10.38□□□□□ -0.75
DDX39A-201ENST00000242776 PEMTQ9UBM1 199 aa10.38□□□□□ -0.75
DDX39A-201ENST00000242776 PCLOQ9Y6V0 5065 aa10.38□□□□□ -0.75
DDX39A-201ENST00000242776 FAM90A26D6RGX4 464 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 ST8SIA3O43173 380 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 IFNA17P01571 189 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 PRH1P02810 166 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 SSBP2P81877 361 aaPredicted RBP10.37□□□□□ -0.75
DDX39A-201ENST00000242776 CYCSP99999 105 aaKnown RBP10.37□□□□□ -0.75
DDX39A-201ENST00000242776 EWSR1Q01844 656 aaKnown RBP eCLIP10.37□□□□□ -0.758e-7■□□□□ 11.3
DDX39A-201ENST00000242776 MRGPRG-AS1Q2M3A8 158 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 ZNF343Q6P1L6 599 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 ZBTB8BQ8NAP8 495 aaPredicted RBP10.37□□□□□ -0.75
DDX39A-201ENST00000242776 OR52E5Q8NH55 327 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 SRSF12Q8WXF0 261 aaKnown RBP10.37□□□□□ -0.75
DDX39A-201ENST00000242776 WDR89Q96FK6 387 aaPredicted RBP10.37□□□□□ -0.75
DDX39A-201ENST00000242776 C2orf50Q96LR7 162 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 QTRT1Q9BXR0 403 aaKnown RBP10.37□□□□□ -0.75
DDX39A-201ENST00000242776 ENY2Q9NPA8 101 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 SIGLEC8Q9NYZ4 499 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 DNAH10Q8IVF4 4471 aa10.37□□□□□ -0.75
DDX39A-201ENST00000242776 MPTX1A8MV57 137 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 H3BUA1 57 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 MED6O75586 246 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 SPCS3P61009 180 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 HSPE1P61604 102 aaKnown RBP10.36□□□□□ -0.75
DDX39A-201ENST00000242776 AARDQ4LEZ3 155 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 Q6ZRM9 215 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 ASB13Q8WXK3 278 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 OR10C1Q96KK4 312 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 GSKIPQ9P0R6 139 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 TEX50A0A1B0GTY4 177 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 WRBO00258 174 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 PITX3O75364 302 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 TRAPPC2P0DI81 140 aa10.36□□□□□ -0.75
DDX39A-201ENST00000242776 TRAPPC2BP0DI82 140 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms