RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TBX15Q96SF7 602 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 SNHG12Q9BXW3 62 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 MMP23AO75900 390 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 CD33P20138 364 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 IER3P46695 156 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 GNG4P50150 75 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 TPPP2P59282 170 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 PAFAH1B2P68402 229 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 LINC00574Q9H8X3 128 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 GCM1Q9NP62 436 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 RNF7Q9UBF6 113 aa12.67□□□□□ -0.38
CTSD-201ENST00000236671 CADP27708 2225 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 HELTA6NFD8 242 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
CTSD-201ENST00000236671 FCN1O00602 326 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 OR10J4P0C629 311 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 CT45A6P0DMU7 189 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 CT45A5P0DMU8 189 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 CT45A7P0DMV0 189 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 CRYBB3P26998 211 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 SLC35E1Q96K37 410 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 IL19Q9UHD0 177 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 TANC2Q9HCD6 1990 aa12.66□□□□□ -0.38
CTSD-201ENST00000236671 GCN1Q92616 2671 aaKnown RBP12.65□□□□□ -0.38
CTSD-201ENST00000236671 TRBV9A0A0B4J1U6 114 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 ZNF705FA8MVS1 300 aaPredicted RBP12.65□□□□□ -0.38
CTSD-201ENST00000236671 SNURFLB1AK76 121 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 F2Z2F3 143 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 ZNF705DP0CH99 300 aaPredicted RBP12.65□□□□□ -0.38
CTSD-201ENST00000236671 ZNF705BP0CI00 300 aaPredicted RBP12.65□□□□□ -0.38
CTSD-201ENST00000236671 TPTE2P1Q5T6R2 138 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 OR8I2Q8N0Y5 310 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 TECRQ9NZ01 308 aaKnown RBP12.65□□□□□ -0.38
CTSD-201ENST00000236671 RAI1Q7Z5J4 1906 aaPredicted RBP12.65□□□□□ -0.38
CTSD-201ENST00000236671 TEX50A0A1B0GTY4 177 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 GGTLC3B5MD39 225 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 OR5G3P0C626 314 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 GATA2P23769 480 aaPredicted RBP12.65□□□□□ -0.38
CTSD-201ENST00000236671 Q0VG73 95 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 C2orf83Q53S99 150 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 PQLC2Q6ZP29 291 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 SLC25A48Q6ZT89 311 aaKnown RBP12.65□□□□□ -0.38
CTSD-201ENST00000236671 FAM216BQ8N7L0 139 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 ST6GALNAC3Q8NDV1 305 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 DEFB108BQ8NET1 73 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 CCL13Q99616 98 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 GNB1LQ9BYB4 327 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 ZNRD1Q9P1U0 126 aa12.65□□□□□ -0.38
CTSD-201ENST00000236671 RANP62826 216 aaKnown RBP12.64□□□□□ -0.39
CTSD-201ENST00000236671 RTL8BQ17RB0 113 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 C3orf36Q3SXR2 165 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 TEX43Q6ZNM6 134 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 DOLPP1Q86YN1 238 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 NEU1Q99519 415 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 HSPB9Q9BQS6 159 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 SLC35D1Q9NTN3 355 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 RPUSD1Q9UJJ7 312 aaKnown RBP12.64□□□□□ -0.39
CTSD-201ENST00000236671 HIVEP3Q5T1R4 2406 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 HELZ2Q9BYK8 2649 aaKnown RBP12.64□□□□□ -0.39
CTSD-201ENST00000236671 TCAPO15273 167 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 OR7C2O60412 319 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 IGHV1-46P01743 117 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 RAB4AP20338 218 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 TNFAIP6P98066 277 aaPredicted RBP12.64□□□□□ -0.39
CTSD-201ENST00000236671 TOMM20LQ6UXN7 152 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 ZNF788Q6ZQV5 615 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 PNKDQ8N490 385 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 RPRMLQ8N4K4 120 aa12.64□□□□□ -0.39
CTSD-201ENST00000236671 SNRNP40Q96DI7 357 aaKnown RBP12.64□□□□□ -0.39
CTSD-201ENST00000236671 RNASE7Q9H1E1 156 aaKnown RBP12.64□□□□□ -0.39
CTSD-201ENST00000236671 CRYBG3Q68DQ2 2970 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 M0R143 59 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 RNASE2P10153 161 aaKnown RBP12.63□□□□□ -0.39
CTSD-201ENST00000236671 CDKN1AP38936 164 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 ATP5IP56385 69 aaPredicted RBP12.63□□□□□ -0.39
CTSD-201ENST00000236671 CX3CL1P78423 397 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 TMEM30BQ3MIR4 351 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 BAGE3Q86Y29 109 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 BAGE2Q86Y30 109 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 OR1L8Q8NGR8 309 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 OR9G1Q8NH87 305 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 OSTCQ9NRP0 149 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 BET1LQ9NYM9 111 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 FAM215AQ9Y5M1 114 aa12.63□□□□□ -0.39
CTSD-201ENST00000236671 IGLV2-8P01709 118 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 SAA1P0DJI8 122 aaPredicted RBP12.62□□□□□ -0.39
CTSD-201ENST00000236671 MLANAQ16655 118 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 TDRG1Q3Y452 100 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 OR5B3Q8NH48 314 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 IGF2BP2-AS1Q96M15 143 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 ATG101Q9BSB4 218 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 C19orf24Q9BVV8 132 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 TNCP24821 2201 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 POLEQ07864 2286 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 TAS2R45P59539 299 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 OR5AU1Q8NGC0 362 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 C20orf144Q9BQM9 153 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 GNB4Q9HAV0 340 aa12.62□□□□□ -0.39
CTSD-201ENST00000236671 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms