RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 C19orf24Q9BVV8 132 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 GGTLC3B5MD39 225 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 OR7C2O60412 319 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 OR10J4P0C629 311 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 CD69Q07108 199 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 NUP37Q8NFH4 326 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 OR9G1Q8NH87 305 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 OSR1Q8TAX0 266 aaPredicted RBP13.24□□□□□ -0.29
LTBR-201ENST00000228918 MRPL20Q9BYC9 149 aaKnown RBP13.24□□□□□ -0.29
LTBR-201ENST00000228918 TTC28Q96AY4 2481 aa13.24□□□□□ -0.29
LTBR-201ENST00000228918 NKX6-3A6NJ46 265 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 ESDP10768 282 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 TAS2R45P59539 299 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 MLANAQ16655 118 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 ARL6IP6Q8N6S5 226 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 OR10W1Q8NGF6 305 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 FRMD6-AS1P0C7T7 363 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 CRISP2P16562 243 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 IER3P46695 156 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 ZNF705AQ6ZN79 300 aaPredicted RBP13.23□□□□□ -0.29
LTBR-201ENST00000228918 HARBI1Q96MB7 349 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 GAL3ST2Q9H3Q3 398 aa13.23□□□□□ -0.29
LTBR-201ENST00000228918 TRBV9A0A0B4J1U6 114 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 SNURFLB1AK76 121 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 APOA2P02652 100 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 DOLPP1Q86YN1 238 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 C20orf144Q9BQM9 153 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 NDUFA4L2Q9NRX3 87 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 CUL9Q8IWT3 2517 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 H0YJW9 148 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 FCN1O00602 326 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 BRS3P32247 399 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 PAFAH1B2P68402 229 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 CCL8P80075 99 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 SLC25A33Q9BSK2 321 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 OSTCQ9NRP0 149 aa13.22□□□□□ -0.29
LTBR-201ENST00000228918 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 PSMB11A5LHX3 300 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 DLL1O00548 723 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 SERF1AO75920 110 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 C8orf88P0DMB2 117 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 TPPP2P59282 170 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 MEF2CQ06413 473 aaPredicted RBP13.21□□□□□ -0.29
LTBR-201ENST00000228918 TBX15Q96SF7 602 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 MIEN1Q9BRT3 115 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 MRPL32Q9BYC8 188 aaKnown RBP13.21□□□□□ -0.29
LTBR-201ENST00000228918 COMMD5Q9GZQ3 224 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 TMEM106BQ9NUM4 274 aa13.21□□□□□ -0.29
LTBR-201ENST00000228918 IGLV2-8P01709 118 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 CCL3L1P16619 93 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 TNFRSF1AP19438 455 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 CHRNB4P30926 498 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 RPL8P62917 257 aaKnown RBP13.2□□□□□ -0.3
LTBR-201ENST00000228918 TIGITQ495A1 244 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 TMEM177Q53S58 311 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 Q6ZWC4 215 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 RBMXL3Q8N7X1 1067 aaKnown RBP13.2□□□□□ -0.3
LTBR-201ENST00000228918 ST6GALNAC3Q8NDV1 305 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 OR5AN1Q8NGI8 311 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 FAM57AQ8TBR7 257 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 CACNG8Q8WXS5 425 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 IGF2BP2-AS1Q96M15 143 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 GNB1LQ9BYB4 327 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 RNASE7Q9H1E1 156 aaKnown RBP13.2□□□□□ -0.3
LTBR-201ENST00000228918 RP1L1Q8IWN7 2480 aaPredicted RBP13.2□□□□□ -0.3
LTBR-201ENST00000228918 INS-IGF2F8WCM5 200 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 FCN3O75636 299 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 Q0VG73 95 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 ZNF714Q96N38 554 aa13.2□□□□□ -0.3
LTBR-201ENST00000228918 DMXL1Q9Y485 3027 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 K7EM74 188 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 RANP62826 216 aaKnown RBP13.19□□□□□ -0.3
LTBR-201ENST00000228918 SUMO1P63165 101 aaKnown RBP13.19□□□□□ -0.3
LTBR-201ENST00000228918 CX3CL1P78423 397 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 TMEM108Q6UXF1 575 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 FAM167A-AS1Q96KT0 104 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 SLC25A2Q9BXI2 301 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 C17orf100A8MU93 164 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 ZNF705FA8MVS1 300 aaPredicted RBP13.19□□□□□ -0.3
LTBR-201ENST00000228918 E7EUB6 86 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 F2Z2F3 143 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 ISLRO14498 428 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 ZNF705DP0CH99 300 aaPredicted RBP13.19□□□□□ -0.3
LTBR-201ENST00000228918 ZNF705BP0CI00 300 aaPredicted RBP13.19□□□□□ -0.3
LTBR-201ENST00000228918 PPOXP50336 477 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 ERHP84090 104 aaKnown RBP13.19□□□□□ -0.3
LTBR-201ENST00000228918 FXYD3Q14802 87 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 TEX43Q6ZNM6 134 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 OR2T6Q8NHC8 308 aa13.19□□□□□ -0.3
LTBR-201ENST00000228918 MT-ND6P03923 174 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 USF1P22415 310 aaPredicted RBP13.18□□□□□ -0.3
LTBR-201ENST00000228918 REG1BP48304 166 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 ADIPOQQ15848 244 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 TMEM167AQ8TBQ9 72 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 RNF2Q99496 336 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 CD33P20138 364 aa13.18□□□□□ -0.3
LTBR-201ENST00000228918 UBE2L3P68036 154 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms