RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 FAM71F2Q6NXP2 309 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 C14orf144Q96I85 54 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 CCL13Q99616 98 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 TANC2Q9HCD6 1990 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 OR10J4P0C629 311 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 IGFBP2P18065 325 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 SELENOTP62341 195 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 FAM201AQ5SY85 155 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 OR4P4Q8NGL7 312 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 OR4A5Q8NH83 315 aa20.27■□□□□ 0.84
RUNDC3A-201ENST00000225441 A0A087X0M5 115 aa20.26■□□□□ 0.83
RUNDC3A-201ENST00000225441 TRBV9A0A0B4J1U6 114 aa20.26■□□□□ 0.83
RUNDC3A-201ENST00000225441 A0A1B0GX30 115 aa20.26■□□□□ 0.83
RUNDC3A-201ENST00000225441 OR4A8P0C604 315 aa20.26■□□□□ 0.83
RUNDC3A-201ENST00000225441 IQCJQ1A5X6 159 aa20.26■□□□□ 0.83
RUNDC3A-201ENST00000225441 COX19Q49B96 90 aa20.26■□□□□ 0.83
RUNDC3A-201ENST00000225441 C8orf31Q8N9H6 132 aa20.26■□□□□ 0.83
RUNDC3A-201ENST00000225441 TEX50A0A1B0GTY4 177 aa20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 VSTM5A8MXK1 200 aa20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 E7EQL1 145 aa20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 APOA2P02652 100 aa20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 UTF1Q5T230 341 aa20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 NABP2Q9BQ15 211 aa20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 MRPL32Q9BYC8 188 aaKnown RBP20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 OR5G3P0C626 314 aa20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 LOXP28300 417 aaPredicted RBP20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 BEND2Q8NDZ0 799 aa20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 EAF1Q96JC9 268 aaPredicted RBP20.25■□□□□ 0.83
RUNDC3A-201ENST00000225441 ADGRG4Q8IZF6 3080 aa20.24■□□□□ 0.83
RUNDC3A-201ENST00000225441 SPATA31B1PQ5VZV4 182 aa20.24■□□□□ 0.83
RUNDC3A-201ENST00000225441 DSCAMO60469 2012 aa20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 PLAUP00749 431 aa20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 GNG10P50151 68 aa20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 ZNF90Q03938 601 aa20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 TMEM177Q53S58 311 aa20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 FAM216BQ8N7L0 139 aa20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 HINT2Q9BX68 163 aa20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 ANKHD1Q8IWZ3 2542 aaKnown RBP20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 MRPL41Q8IXM3 137 aaKnown RBP20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 DEFB108BQ8NET1 73 aa20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 AURKAIP1Q9NWT8 199 aaPredicted RBP20.23■□□□□ 0.83
RUNDC3A-201ENST00000225441 A0A1W2PN81 502 aa20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 A0A1W2PRE2 83 aa20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 PGPEP1LA6NFU8 196 aa20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 C19orf84I3L1E1 186 aa20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 RNASE2P10153 161 aaKnown RBP20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 ESDP10768 282 aa20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 ERHP84090 104 aaKnown RBP20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 CD69Q07108 199 aa20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 DUX4L9Q6RFH8 374 aaPredicted RBP20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 MIR17HGQ75NE6 70 aa20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 VSTM2AQ8TAG5 236 aa20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 KMT2BQ9UMN6 2715 aaPredicted RBP20.22■□□□□ 0.83
RUNDC3A-201ENST00000225441 HELTA6NFD8 242 aa20.21■□□□□ 0.83
RUNDC3A-201ENST00000225441 A8MWP6 167 aa20.21■□□□□ 0.83
RUNDC3A-201ENST00000225441 FOXH1O75593 365 aa20.21■□□□□ 0.83
RUNDC3A-201ENST00000225441 PAFAH1B2P68402 229 aa20.21■□□□□ 0.83
RUNDC3A-201ENST00000225441 RPEL1Q2QD12 228 aa20.21■□□□□ 0.83
RUNDC3A-201ENST00000225441 LINC00311Q8N616 119 aa20.21■□□□□ 0.83
RUNDC3A-201ENST00000225441 OR5AN1Q8NGI8 311 aa20.21■□□□□ 0.83
RUNDC3A-201ENST00000225441 ZNF596Q8TC21 504 aa20.21■□□□□ 0.83
RUNDC3A-201ENST00000225441 USF1P22415 310 aaPredicted RBP20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 LGALS4P56470 323 aa20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 PSG5Q15238 335 aa20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 OSTCQ9NRP0 149 aa20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 NDUFA4L2Q9NRX3 87 aa20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 PLCE1Q9P212 2302 aa20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 SRRM4A7MD48 611 aaKnown RBP20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 K7EN84 100 aa20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 MMP23AO75900 390 aa20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 SAA1P0DJI8 122 aaPredicted RBP20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 APOBEC3AP31941 199 aaPredicted RBP20.2■□□□□ 0.82
RUNDC3A-201ENST00000225441 ZNF462Q96JM2 2506 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 C17orf100A8MU93 164 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 C8orf88P0DMB2 117 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 NDUFB7P17568 137 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 GNG4P50150 75 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 ZNF672Q499Z4 452 aaPredicted RBP20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 ZNF664Q8N3J9 261 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 ZNF714Q96N38 554 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 COMMD5Q9GZQ3 224 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 PRO1933Q9H354 126 aa20.19■□□□□ 0.82
RUNDC3A-201ENST00000225441 MT-ND6P03923 174 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 IGKV1-16P04430 117 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 OR10J1P30954 320 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 PDPNQ86YL7 162 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 TMEM167AQ8TBQ9 72 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 NDUFAF3Q9BU61 184 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 GNB1LQ9BYB4 327 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 H0YJW9 148 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 ADMP35318 185 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 TIGITQ495A1 244 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 WDR73Q6P4I2 378 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 TMEM186Q96B77 213 aa20.18■□□□□ 0.82
RUNDC3A-201ENST00000225441 SUB1P53999 127 aaKnown RBP eCLIP20.17■□□□□ 0.82
RUNDC3A-201ENST00000225441 RPL8P62917 257 aaKnown RBP20.17■□□□□ 0.82
RUNDC3A-201ENST00000225441 SLC25A33Q9BSK2 321 aa20.17■□□□□ 0.82
RUNDC3A-201ENST00000225441 V9GYV3 84 aa20.17■□□□□ 0.82
RUNDC3A-201ENST00000225441 RAI1Q7Z5J4 1906 aaPredicted RBP20.17■□□□□ 0.82
RUNDC3A-201ENST00000225441 ZNF705GA8MUZ8 300 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms