RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ZNF714Q96N38 554 aa11.89□□□□□ -0.51
CNOT3-201ENST00000221232 LRBAP50851 2863 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 DSCAML1Q8TD84 2053 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 PPIAL4EA0A075B759 164 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 HELTA6NFD8 242 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 PPIAL4DF5H284 164 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 TSTD3H0UI37 97 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 SCGB1D1O95968 90 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 PPIAL4FP0DN26 164 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 MGST1P10620 155 aaKnown RBP11.88□□□□□ -0.51
CNOT3-201ENST00000221232 IER3P46695 156 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 TMEM144Q7Z5S9 345 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 FLYWCH2Q96CP2 140 aaKnown RBP11.88□□□□□ -0.51
CNOT3-201ENST00000221232 PPIAL4AQ9Y536 164 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 ITGB1BP1O14713 200 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 MT-CO2P00403 227 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 RNASE2P10153 161 aaKnown RBP11.88□□□□□ -0.51
CNOT3-201ENST00000221232 PKIAP61925 76 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 TCF15Q12870 199 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 CENPWQ5EE01 88 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 TPSG1Q9NRR2 321 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 LINC00312Q9Y6C7 94 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 MUC6Q6W4X9 2439 aa11.88□□□□□ -0.51
CNOT3-201ENST00000221232 NAV3Q8IVL0 2385 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 APOA2P02652 100 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 TYMSP04818 313 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 FOXL1Q12952 345 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 TMEM249Q2WGJ8 235 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 KRTCAP3Q53RY4 240 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 OR8I2Q8N0Y5 310 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 TMEM18Q96B42 140 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 EAF1Q96JC9 268 aaPredicted RBP11.87□□□□□ -0.51
CNOT3-201ENST00000221232 SERTAD4Q9NUC0 356 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 H0YJW9 148 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 MKRN2OSH3BPM6 223 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 GNG4P50150 75 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 RPL8P62917 257 aaKnown RBP11.87□□□□□ -0.51
CNOT3-201ENST00000221232 LCN2P80188 198 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 KIAA1644Q3SXP7 199 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 SGK494Q96LW2 274 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 GAL3ST2Q9H3Q3 398 aa11.87□□□□□ -0.51
CNOT3-201ENST00000221232 PYYP10082 97 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 PRR31Q5SQ13 230 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 HCP5Q6MZN7 132 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 NPIPB3Q92617 1050 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 CORO2AQ92828 525 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 ABCA4P78363 2273 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 SLC25A17O43808 307 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 CA1P00915 261 aaPredicted RBP11.86□□□□□ -0.51
CNOT3-201ENST00000221232 ANKRD39Q53RE8 183 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 OR1L6Q8NGR2 347 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 DYNLRB1Q9NP97 96 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 TECRQ9NZ01 308 aaKnown RBP11.86□□□□□ -0.51
CNOT3-201ENST00000221232 SVEP1Q4LDE5 3571 aa11.86□□□□□ -0.51
CNOT3-201ENST00000221232 GGTLC3B5MD39 225 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 F2Z2F3 143 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 TMEM178BH3BS89 294 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 FCN1O00602 326 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 NDUFB3O43676 98 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 CD99P14209 185 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 RAB4BP61018 213 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 ERHP84090 104 aaKnown RBP11.85□□□□□ -0.51
CNOT3-201ENST00000221232 MRPL36Q9P0J6 103 aaKnown RBP11.85□□□□□ -0.51
CNOT3-201ENST00000221232 CTSZQ9UBR2 303 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 TANC2Q9HCD6 1990 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 TRAV34A0A0B4J273 112 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 PRB4P10163 310 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-201ENST00000221232 WT1-ASQ06250 92 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 POU2AF1Q16633 256 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 MAJINQ3KP22 176 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 COA6Q5JTJ3 125 aaKnown RBP11.85□□□□□ -0.51
CNOT3-201ENST00000221232 RUSC1-AS1Q66K80 236 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 MMD2Q8IY49 270 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 GBGT1Q8N5D6 347 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 TMEM106BQ9NUM4 274 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 ZNF257Q9Y2Q1 563 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 CD69Q07108 199 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 IGF2-ASQ6U949 168 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 ZNF833PQ6ZTB9 187 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 NUP37Q8NFH4 326 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
CNOT3-201ENST00000221232 NCOR1P1Q9H4R4 102 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 FNDC4Q9H6D8 234 aaPredicted RBP11.85□□□□□ -0.51
CNOT3-201ENST00000221232 IL36BQ9NZH7 164 aa11.85□□□□□ -0.51
CNOT3-201ENST00000221232 TLN1Q9Y490 2541 aaKnown RBP11.84□□□□□ -0.51
CNOT3-201ENST00000221232 ZZEF1O43149 2961 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 PDLIM4P50479 330 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 OR1L8Q8NGR8 309 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 ZNF430Q9H8G1 570 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-201ENST00000221232 NDUFA4L2Q9NRX3 87 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 BET1LQ9NYM9 111 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 SNURFLB1AK76 121 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 OR5G3P0C626 314 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 USF2Q15853 346 aaPredicted RBP11.84□□□□□ -0.51
CNOT3-201ENST00000221232 C3orf36Q3SXR2 165 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 C2orf83Q53S99 150 aa11.84□□□□□ -0.51
CNOT3-201ENST00000221232 OR5B3Q8NH48 314 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms