RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 FHL3Q13643 280 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 C2orf83Q53S99 150 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 FAM209BQ5JX69 171 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 C11orf87Q6NUJ2 197 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 GSG1LQ6UXU4 331 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 SLC24A4Q8NFF2 622 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 VN1R17PQ8TDU5 208 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 ALG5Q9Y673 324 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 U3KQ87 197 aa18.24■□□□□ 0.51
HOMER3-201ENST00000221222 FAM25EA8MYX2 175 aa18.23■□□□□ 0.51
HOMER3-201ENST00000221222 CCL24O00175 119 aa18.23■□□□□ 0.51
HOMER3-201ENST00000221222 SSNA1O43805 119 aa18.23■□□□□ 0.51
HOMER3-201ENST00000221222 OR11H1Q8NG94 326 aa18.23■□□□□ 0.51
HOMER3-201ENST00000221222 EEF1AKMT3Q96AZ1 226 aa18.23■□□□□ 0.51
HOMER3-201ENST00000221222 CIB3Q96Q77 187 aaPredicted RBP18.23■□□□□ 0.51
HOMER3-201ENST00000221222 MAGT1Q9H0U3 335 aa18.23■□□□□ 0.51
HOMER3-201ENST00000221222 GSKIPQ9P0R6 139 aa18.23■□□□□ 0.51
HOMER3-201ENST00000221222 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.22■□□□□ 0.51
HOMER3-201ENST00000221222 MFSD2BA6NFX1 497 aa18.22■□□□□ 0.51
HOMER3-201ENST00000221222 K7EIM0 57 aa18.22■□□□□ 0.51
HOMER3-201ENST00000221222 CORTO00230 105 aa18.22■□□□□ 0.51
HOMER3-201ENST00000221222 LY86O95711 162 aa18.22■□□□□ 0.51
HOMER3-201ENST00000221222 HSPB1P04792 205 aaKnown RBP18.22■□□□□ 0.51
HOMER3-201ENST00000221222 ATP5IP56385 69 aaPredicted RBP18.22■□□□□ 0.51
HOMER3-201ENST00000221222 OR1N2Q8NGR9 330 aa18.22■□□□□ 0.51
HOMER3-201ENST00000221222 MISP3Q96FF7 219 aa18.22■□□□□ 0.51
HOMER3-201ENST00000221222 PEF1Q9UBV8 284 aaKnown RBP18.22■□□□□ 0.51
HOMER3-201ENST00000221222 TRBV7-1A0A0A6YYK4 115 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 I3L2K1 104 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 GOSR2O14653 212 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 PF4P02776 101 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 NPY1RP25929 384 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 POLR2GP62487 172 aaKnown RBP eCLIP18.21■□□□□ 0.51
HOMER3-201ENST00000221222 ZNF616Q08AN1 781 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 NOXA1Q86UR1 476 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 ZNF502Q8TBZ5 544 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 TMEM170AQ8WVE7 144 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 CCDC140Q96MF4 163 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 DUX3Q96PT4 197 aa18.21■□□□□ 0.51
HOMER3-201ENST00000221222 RANGRFQ9HD47 186 aaPredicted RBP18.21■□□□□ 0.51
HOMER3-201ENST00000221222 IAPPP10997 89 aa18.2■□□□□ 0.5
HOMER3-201ENST00000221222 IL15RAQ13261 267 aa18.2■□□□□ 0.5
HOMER3-201ENST00000221222 SCARB1Q8WTV0 552 aa18.2■□□□□ 0.5
HOMER3-201ENST00000221222 NOTCH1P46531 2555 aa18.2■□□□□ 0.5
HOMER3-201ENST00000221222 IGHV4OR15-8A0A075B7B6 117 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 A0A087WW49 117 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 ANKRD34BA5PLL1 514 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 LINC01619G3V211 115 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 WRBO00258 174 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 IFNA10P01566 189 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 MBPP02686 304 aaPredicted RBP18.19■□□□□ 0.5
HOMER3-201ENST00000221222 DPF1Q92782 380 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 ATP6V0BQ99437 205 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 S4R3C0 116 aa18.19■□□□□ 0.5
HOMER3-201ENST00000221222 SCGB1D2O95969 90 aa18.18■□□□□ 0.5
HOMER3-201ENST00000221222 MT-CO2P00403 227 aa18.18■□□□□ 0.5
HOMER3-201ENST00000221222 TRBV12-3P01733 135 aa18.18■□□□□ 0.5
HOMER3-201ENST00000221222 LINC00482Q8N8I6 264 aa18.18■□□□□ 0.5
HOMER3-201ENST00000221222 RNASEH2CQ8TDP1 164 aaKnown RBP18.18■□□□□ 0.5
HOMER3-201ENST00000221222 PINX1Q96BK5 328 aaKnown RBP18.18■□□□□ 0.5
HOMER3-201ENST00000221222 C21orf62Q9NYP8 219 aa18.18■□□□□ 0.5
HOMER3-201ENST00000221222 TGP01266 2768 aa18.18■□□□□ 0.5
HOMER3-201ENST00000221222 SIX6O95475 246 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 IGHV3-23P01764 117 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 OR8U8P0C7N1 319 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 RAB40CQ96S21 281 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 RCL1Q9Y2P8 373 aaKnown RBP18.17■□□□□ 0.5
HOMER3-201ENST00000221222 IGHV3-21A0A0B4J1V1 117 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 C15orf62A8K5M9 175 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 SSSCA1O60232 199 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 FCGR2BP31994 310 aaPredicted RBP18.17■□□□□ 0.5
HOMER3-201ENST00000221222 H2BFSP57053 126 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 CLEC19AQ6UXS0 136 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 SMIM8Q96KF7 97 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 NMES1Q9C002 83 aa18.17■□□□□ 0.5
HOMER3-201ENST00000221222 F8W735 103 aaPredicted RBP18.16■□□□□ 0.5
HOMER3-201ENST00000221222 K7EPK0 472 aa18.16■□□□□ 0.5
HOMER3-201ENST00000221222 BMPR1BO00238 502 aa18.16■□□□□ 0.5
HOMER3-201ENST00000221222 TMEM50AO95807 157 aa18.16■□□□□ 0.5
HOMER3-201ENST00000221222 ZP3P21754 424 aa18.16■□□□□ 0.5
HOMER3-201ENST00000221222 TAS2R30P59541 319 aa18.16■□□□□ 0.5
HOMER3-201ENST00000221222 RPP30P78346 268 aaKnown RBP18.16■□□□□ 0.5
HOMER3-201ENST00000221222 WFDC9Q8NEX5 89 aa18.16■□□□□ 0.5
HOMER3-201ENST00000221222 TXN2Q99757 166 aa18.16■□□□□ 0.5
HOMER3-201ENST00000221222 FNDC4Q9H6D8 234 aaPredicted RBP18.16■□□□□ 0.5
HOMER3-201ENST00000221222 MGAT4CQ9UBM8 478 aa18.16■□□□□ 0.5
HOMER3-201ENST00000221222 CLEC3BP05452 202 aa18.15■□□□□ 0.5
HOMER3-201ENST00000221222 HOXD3P31249 432 aaPredicted RBP18.15■□□□□ 0.5
HOMER3-201ENST00000221222 OPRK1P41145 380 aa18.15■□□□□ 0.5
HOMER3-201ENST00000221222 PAX9P55771 341 aa18.15■□□□□ 0.5
HOMER3-201ENST00000221222 CYCSP99999 105 aaKnown RBP18.15■□□□□ 0.5
HOMER3-201ENST00000221222 RPS10-NUDT3A0A1W2PQS6 291 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 GPR183P32249 361 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 ARL3P36405 182 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 SLURP1P55000 103 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 MFAP4P55083 255 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 RAB11AP62491 216 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 RAB32Q13637 225 aa18.14■□□□□ 0.49
HOMER3-201ENST00000221222 BSCL2Q96G97 398 aaPredicted RBP18.14■□□□□ 0.49
HOMER3-201ENST00000221222 OR4C12Q96R67 309 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms