RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 C15orf62A8K5M9 175 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 FXYD7P58549 80 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 PLXDC1Q8IUK5 500 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 ADTRPQ96IZ2 230 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 C1QTNF5Q9BXJ0 243 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 ENY2Q9NPA8 101 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 FER1L5A0AVI2 2057 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 C9JCJ5 164 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 PRB4P10163 310 aaPredicted RBP12.14□□□□□ -0.47
PTPRA-201ENST00000216877 RNPS1Q15287 305 aaKnown RBP12.14□□□□□ -0.47
PTPRA-201ENST00000216877 FAM27BQ5VT28 67 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 FA2HQ7L5A8 372 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 OR5A1Q8NGJ0 315 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 DEFB126Q9BYW3 111 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 CFAP54Q96N23 3096 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 SPTY2D1-AS1A0A0U1RR47 76 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 TEX50A0A1B0GTY4 177 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 H3BRM9 83 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 KLK10O43240 276 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 GDF5OSQ5U4N7 250 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 CCDC144NLQ6NUI1 221 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 UBALD2Q8IYN6 164 aa12.14□□□□□ -0.47
PTPRA-201ENST00000216877 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 LOC389332A0A1B0GUA5 103 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 A0A1W2PPM0 123 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 CEBPDP49716 269 aaPredicted RBP12.13□□□□□ -0.47
PTPRA-201ENST00000216877 WFDC2Q14508 124 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 C5orf30Q96GV9 206 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 CDX2Q99626 313 aaPredicted RBP12.13□□□□□ -0.47
PTPRA-201ENST00000216877 FOXB1Q99853 325 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 HES4Q9HCC6 221 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 J3QR06 171 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 SYNGR3O43761 229 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 KLF7O75840 302 aaPredicted RBP12.13□□□□□ -0.47
PTPRA-201ENST00000216877 CYC1P08574 325 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 CD27P26842 260 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 PRSS3P2Q8NHM4 247 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
PTPRA-201ENST00000216877 RALYQ9UKM9 306 aaKnown RBP12.13□□□□□ -0.47
PTPRA-201ENST00000216877 ICE1Q9Y2F5 2266 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 OPRK1P41145 380 aa12.13□□□□□ -0.47
PTPRA-201ENST00000216877 SNRNP40Q96DI7 357 aaKnown RBP12.13□□□□□ -0.47
PTPRA-201ENST00000216877 PMS2P5A8MQ11 134 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 K7ERJ3 54 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 UFSP1Q6NVU6 142 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 NEGR1Q7Z3B1 354 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 ROS1P08922 2347 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 TMEM265A0A087WTH1 108 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 KBTBD11-OT1A0A1B0GTJ5 212 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 LIPFP07098 398 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 SUMO3P55854 103 aaPredicted RBP12.12□□□□□ -0.47
PTPRA-201ENST00000216877 SLC23A3Q6PIS1 610 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 SLC22A18ASQ8N1D0 253 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 ARPC1AQ92747 370 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 IGKV3D-11A0A0A0MRZ8 115 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 TEPPQ6URK8 271 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 DAZAP1Q96EP5 407 aaKnown RBP12.12□□□□□ -0.47
PTPRA-201ENST00000216877 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
PTPRA-201ENST00000216877 CRYGSP22914 178 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 PPIFP30405 207 aaKnown RBP12.11□□□□□ -0.47
PTPRA-201ENST00000216877 FCGR2BP31994 310 aaPredicted RBP12.11□□□□□ -0.47
PTPRA-201ENST00000216877 ERVK-16P61578 105 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 UBE2L3P68036 154 aaKnown RBP12.11□□□□□ -0.47
PTPRA-201ENST00000216877 ANXA2RQ3ZCQ2 193 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 FAM162BQ5T6X4 162 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 OR10D3Q8NH80 312 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 RAB1CQ92928 201 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 ANKRD30BLA7E2S9 258 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 SMIM13P0DJ93 91 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 COX8AP10176 69 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 TAS2R45P59539 299 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 AMTNQ6UX39 209 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 PSMB11A5LHX3 300 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 GALMQ96C23 342 aa12.11□□□□□ -0.47
PTPRA-201ENST00000216877 PLAUP00749 431 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 NGFP01138 241 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 GRPP07492 148 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 DAZAP2Q15038 168 aaPredicted RBP12.1□□□□□ -0.47
PTPRA-201ENST00000216877 NRN1LQ496H8 165 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 TIMM23BQ5SRD1 257 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 TMEM167BQ9NRX6 74 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 NHP2Q9NX24 153 aaKnown RBP12.1□□□□□ -0.47
PTPRA-201ENST00000216877 ANKRD37Q7Z713 158 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 YRDCQ86U90 279 aaKnown RBP12.1□□□□□ -0.47
PTPRA-201ENST00000216877 IGLV2-14P01704 120 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 CXorf67Q86X51 503 aaPredicted RBP12.1□□□□□ -0.47
PTPRA-201ENST00000216877 MS4A6AQ9H2W1 248 aa12.1□□□□□ -0.47
PTPRA-201ENST00000216877 TFF1P04155 84 aa12.09□□□□□ -0.47
PTPRA-201ENST00000216877 Q6ZR03 302 aa12.09□□□□□ -0.47
PTPRA-201ENST00000216877 MRAP2Q96G30 205 aa12.09□□□□□ -0.47
PTPRA-201ENST00000216877 MBNL3Q9NUK0 354 aaKnown RBP12.09□□□□□ -0.47
PTPRA-201ENST00000216877 IGHV1OR15-9A0A0B4J2B8 117 aa12.09□□□□□ -0.47
PTPRA-201ENST00000216877 SMIM27A0A1W2PRY6 76 aa12.09□□□□□ -0.47
PTPRA-201ENST00000216877 A8MWL6 223 aa12.09□□□□□ -0.47
PTPRA-201ENST00000216877 PATE3B3GLJ2 98 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms