RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 NPBQ8NG41 125 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 TVP23CQ96ET8 276 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 ACY3Q96HD9 319 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 C19orf24Q9BVV8 132 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 REG1AP05451 166 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 RNF224P0DH78 156 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 UBE2E1P51965 193 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 MLANAQ16655 118 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 OR1P1Q8NH06 330 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 SRSF12Q8WXF0 261 aaKnown RBP13.93□□□□□ -0.18
VRK1-201ENST00000216639 C22orf15Q8WYQ4 148 aa13.93□□□□□ -0.18
VRK1-201ENST00000216639 HRNRQ86YZ3 2850 aaPredicted RBP13.92□□□□□ -0.18
VRK1-201ENST00000216639 TMEM250H0YL14 139 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 CNIH1O95406 144 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 LINC00869P0C866 280 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 FAM90A2PQ658T7 463 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 PVRIGQ6DKI7 326 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 CLEC2AQ6UVW9 174 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 OR2T6Q8NHC8 308 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 EAF1Q96JC9 268 aaPredicted RBP13.92□□□□□ -0.18
VRK1-201ENST00000216639 LPAR2Q9HBW0 351 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 POLR3KQ9Y2Y1 108 aaPredicted RBP13.92□□□□□ -0.18
VRK1-201ENST00000216639 TNCP24821 2201 aa13.92□□□□□ -0.18
VRK1-201ENST00000216639 IGKV1OR2-108A0A075B7D4 117 aa13.91□□□□□ -0.18
VRK1-201ENST00000216639 PAGE4O60829 102 aa13.91□□□□□ -0.18
VRK1-201ENST00000216639 NDUFA3O95167 84 aa13.91□□□□□ -0.18
VRK1-201ENST00000216639 ATP5J2P56134 94 aa13.91□□□□□ -0.18
VRK1-201ENST00000216639 CD81P60033 236 aa13.91□□□□□ -0.18
VRK1-201ENST00000216639 ABHD5Q8WTS1 349 aa13.91□□□□□ -0.18
VRK1-201ENST00000216639 MALSU1Q96EH3 234 aa13.91□□□□□ -0.18
VRK1-201ENST00000216639 MISP3Q96FF7 219 aa13.91□□□□□ -0.18
VRK1-201ENST00000216639 TEX22C9J3V5 150 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 ARL14EPLP0DKL9 152 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 AREGP15514 252 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 ATF4P18848 351 aaPredicted RBP13.9□□□□□ -0.18
VRK1-201ENST00000216639 PNRC1Q12796 327 aaPredicted RBP13.9□□□□□ -0.18
VRK1-201ENST00000216639 SPNS3Q6ZMD2 512 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 CYP2G1PQ6ZSU1 146 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 OR4F5Q8NH21 305 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 C10orf105Q8TEF2 133 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 OR4F4Q96R69 305 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 TBX15Q96SF7 602 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 TXNDC17Q9BRA2 123 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 FNDC4Q9H6D8 234 aaPredicted RBP13.9□□□□□ -0.18
VRK1-201ENST00000216639 TUBA4BQ9H853 241 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 F11RQ9Y624 299 aaKnown RBP13.9□□□□□ -0.18
VRK1-201ENST00000216639 AKR1C3P42330 323 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 FAM78BQ5VT40 261 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 C15orf54Q8N8G6 183 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 NPIPB3Q92617 1050 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 RNF2Q99496 336 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 SEPSECSQ9HD40 501 aaKnown RBP13.9□□□□□ -0.18
VRK1-201ENST00000216639 FUT9Q9Y231 359 aa13.9□□□□□ -0.18
VRK1-201ENST00000216639 ACACBO00763 2458 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 LRBAP50851 2863 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 ZNF727A8MUV8 499 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 B4DEV8 164 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 C11orf94C9JXX5 98 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 FCN1O00602 326 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 COX6B1P14854 86 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 PAX6P26367 422 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 SELENOTP62341 195 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 THAP8Q8NA92 274 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 GATAD1Q8WUU5 269 aa13.89□□□□□ -0.19
VRK1-201ENST00000216639 ARHGAP32A7KAX9 2087 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 TCRBV4S1A1TA0A5B7 111 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 PDE6DO43924 150 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 BRS3P32247 399 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 TAS2R45P59539 299 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 EBI3Q14213 229 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 C5orf64Q2M2E5 130 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 OR1L6Q8NGR2 347 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 TECRQ9NZ01 308 aaKnown RBP13.88□□□□□ -0.19
VRK1-201ENST00000216639 CACNA1BQ00975 2339 aa13.88□□□□□ -0.19
VRK1-201ENST00000216639 CLN5O75503 358 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 CRYGCP07315 174 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 FAM106CPP0CH98 169 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 APELAP0DMC3 54 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 CD24P25063 80 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 GCHFRP30047 84 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 RND2P52198 227 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 FXYD3Q14802 87 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 CST9LP1Q5W188 147 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 DYNAPQ8N1N2 210 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 SMIM7Q9BQ49 75 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 MRPL32Q9BYC8 188 aaKnown RBP13.87□□□□□ -0.19
VRK1-201ENST00000216639 A0A087WWC5 75 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 VWC2LB2RUY7 222 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 F6UZH7 168 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 OR5G3P0C626 314 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 TMEM11P17152 192 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 UBE2G2P60604 165 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 SSBP2P81877 361 aaPredicted RBP13.87□□□□□ -0.19
VRK1-201ENST00000216639 OR1L4Q8NGR5 311 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 PFDN5Q99471 154 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 SLC25A33Q9BSK2 321 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 C1RLQ9NZP8 487 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 NAT8Q9UHE5 227 aa13.87□□□□□ -0.19
VRK1-201ENST00000216639 NCBP2LA6PVI3 153 aaKnown RBP13.86□□□□□ -0.19
VRK1-201ENST00000216639 GATA2P23769 480 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms