RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CACNA1GO43497 2377 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 NAV3Q8IVL0 2385 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 BDP1A6H8Y1 2624 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 CT45A6P0DMU7 189 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 CT45A5P0DMU8 189 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 CT45A7P0DMV0 189 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 KIR2DS2P43631 304 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 REG1BP48304 166 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 BHLHA15Q7RTS1 189 aaPredicted RBP11.43□□□□□ -0.58
USH1C-201ENST00000005226 C1orf174Q8IYL3 243 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 STPG4Q8N801 248 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 TSKUQ8WUA8 353 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 ZNF355PQ9NSJ1 428 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 UPK2O00526 184 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 PLAUP00749 431 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 USF1P22415 310 aaPredicted RBP11.43□□□□□ -0.58
USH1C-201ENST00000005226 GDF5OSQ5U4N7 250 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 PRR27Q6MZM9 219 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 KCNS1Q96KK3 526 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 RNF2Q99496 336 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 OSTCQ9NRP0 149 aa11.43□□□□□ -0.58
USH1C-201ENST00000005226 SLC25A10Q9UBX3 287 aaPredicted RBP11.43□□□□□ -0.58
USH1C-201ENST00000005226 IGHG3P01860 377 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 APCSP02743 223 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 CTRLP40313 264 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 RAB7AP51149 207 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 SSBP4Q9BWG4 385 aaPredicted RBP11.42□□□□□ -0.58
USH1C-201ENST00000005226 SLC35D1Q9NTN3 355 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 ABCA1O95477 2261 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 EP300Q09472 2414 aaPredicted RBP11.42□□□□□ -0.58
USH1C-201ENST00000005226 A0A1W2PN81 502 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 ZNF324O75467 553 aaPredicted RBP11.42□□□□□ -0.58
USH1C-201ENST00000005226 AMY1AP04745 511 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 ZNF883P0CG24 379 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 RPRMLQ8N4K4 120 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 C11orf42Q8N5U0 333 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 IGF2BP2-AS1Q96M15 143 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 SLC25A33Q9BSK2 321 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 PLSCR4Q9NRQ2 329 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 MGAQ8IWI9 3026 aa11.42□□□□□ -0.58
USH1C-201ENST00000005226 TMEM265A0A087WTH1 108 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 CORTO00230 105 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 ISLRO14498 428 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 HYPMO75409 117 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
USH1C-201ENST00000005226 PPOXP50336 477 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 UBE2L3P68036 154 aaKnown RBP11.41□□□□□ -0.58
USH1C-201ENST00000005226 WDR73Q6P4I2 378 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 Q6ZN92 141 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 TXN2Q99757 166 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 DKK4Q9UBT3 224 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 PROCRQ9UNN8 238 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 SLC25A15Q9Y619 301 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 DMXL2Q8TDJ6 3036 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 TRBV9A0A0B4J1U6 114 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 SMIM27A0A1W2PRY6 76 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 DPRXA6NFQ7 191 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 LHBP01229 141 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 C8orf88P0DMB2 117 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 RNASE2P10153 161 aaKnown RBP11.41□□□□□ -0.58
USH1C-201ENST00000005226 CD24P25063 80 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 C21orf62-AS1Q17RA5 79 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 C10orf55Q5SWW7 151 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 ZNF439Q8NDP4 499 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 SLC25A2Q9BXI2 301 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 PRNDQ9UKY0 176 aa11.41□□□□□ -0.58
USH1C-201ENST00000005226 PRR33A8MZF0 331 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 TCF21O43680 179 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 OR5G3P0C626 314 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 CHRNB4P30926 498 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 MFAP2P55001 183 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 GNG5P63218 68 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 TNXAQ16473 311 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 SEM1Q6ZVN7 128 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 CORO2AQ92828 525 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 FAM167A-AS1Q96KT0 104 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 GUCD1Q96NT3 240 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 CLEC7AQ9BXN2 247 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 COLQQ9Y215 455 aaPredicted RBP11.4□□□□□ -0.58
USH1C-201ENST00000005226 DSCAML1Q8TD84 2053 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 CNOT1A5YKK6 2376 aaKnown RBP11.4□□□□□ -0.58
USH1C-201ENST00000005226 SIAH2O43255 324 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 IGLC2P0DOY2 106 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 CAMPP49913 170 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 OR10J3Q5JRS4 329 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 C22orf34Q6ZV56 151 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 ZCCHC24Q8N2G6 241 aaKnown RBP11.4□□□□□ -0.58
USH1C-201ENST00000005226 C1orf162Q8NEQ5 155 aaPredicted RBP11.4□□□□□ -0.58
USH1C-201ENST00000005226 ZNF331Q9NQX6 463 aaPredicted RBP11.4□□□□□ -0.58
USH1C-201ENST00000005226 TUBG2Q9NRH3 451 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 TP73-AS1Q9UF72 201 aa11.4□□□□□ -0.58
USH1C-201ENST00000005226 NDUFB8O95169 186 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 MT-ND6P03923 174 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 PRRX1P54821 245 aa11.39□□□□□ -0.59
USH1C-201ENST00000005226 KLF3P57682 345 aaPredicted RBP11.39□□□□□ -0.59
USH1C-201ENST00000005226 RPL8P62917 257 aaKnown RBP11.39□□□□□ -0.59
USH1C-201ENST00000005226 MZT1Q08AG7 82 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms