RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Olfr221B2RVX8 311 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Rbm24D3Z4I3 236 aaKnown RBP8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cxcl1P12850 96 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 KrasP32883 189 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Foxr2Q3UM89 302 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Lrrc30Q3UV48 300 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr1396Q7TQS8 315 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr907Q7TRC7 310 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Smim4Q8C1Q6 80 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr829Q8VGX1 321 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 PyyQ9EPS2 98 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Nova1Q9JKN6 507 aaKnown RBP8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr1264Q9R0K2 308 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Timm8a1Q9WVA2 97 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Plxnb1Q8CJH3 2119 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm13083A2AGW5 501 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm9376G3UW68 176 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Bcl2P10417 236 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Ccr8P56484 353 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Rps23P62267 143 aaKnown RBP8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Q80W69 301 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cdc42ep2Q8JZX9 214 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gltpd2Q8K0R6 321 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Trib3Q8K4K2 354 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr736Q8VFT6 312 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Slc25a2Q99ML6 265 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 RprmQ9JJ72 109 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Wnt16Q9QYS1 364 aa8.35□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Samt1A2BED8 237 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gm15140A2BEE3 237 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Sh2d1bO35324 132 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Fam57aQ5ND56 257 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 AI987944Q7TPX5 406 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr1204Q7TR10 309 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr58Q7TRF6 309 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Wdyhv1Q80WB5 209 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 RetnlgQ8K426 117 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Xrcc3Q9CXE6 349 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Klk1b27Q9JM71 263 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 HcstQ9QUJ0 79 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Gabrg1Q9R0Y8 465 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Pira2F8VQ94 680 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Tnfrsf1aP25118 454 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr43Q7TRX1 313 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr403Q7TRX2 313 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr335-psQ7TRY6 312 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Cd226Q8K4F0 333 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr1298Q8VGE6 312 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr354Q8VGJ8 317 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Klf7Q99JB0 301 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Epdr1Q99M71 224 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Eaf1Q9D4C5 268 aa8.34□□□□□ -1.07
Pcdh1-201ENSMUST00000057185 Olfr465-ps1A0A0U1RPZ4 315 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Olfr789A0A1L1SV77 312 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Zfp708F8VPP0 541 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Fgf2P15655 154 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Timm8bP62077 83 aaKnown RBP8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Tmem171Q4KL18 322 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Patz1Q5NBY9 687 aaKnown RBP8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Hide1Q75VT8 222 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Tmprss11fQ8BHM9 439 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 RydenQ8CAK3 290 aaKnown RBP8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Mrps18cQ8R2L5 143 aaKnown RBP8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Nkg7Q99PA5 165 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Mrps30Q9D0G0 442 aaKnown RBP8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Vmn1r47Q9EQ51 310 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Eny2Q9JIX0 101 aaKnown RBP8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Mnx1Q9QZW9 404 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Rspo1Q9Z132 265 aa8.34□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Mgst2A2RST1 147 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Gm4175D3YTW8 314 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Gm14288E9Q9W0 88 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Vmn1r114L7N226 321 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Vmn1r126L7N2C8 321 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Pitx3O35160 302 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Ctsll3Q3ULP7 331 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Rtp3Q5QGU6 474 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 ErasQ7TN89 227 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Clec4a1Q80UI7 245 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Prrg4Q8BGN6 226 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Prss45Q8K4I7 317 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Ntng2Q8R4F1 589 aaKnown RBP8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Nup35Q8R4R6 325 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Exosc2Q8VBV3 293 aaKnown RBP8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Olfr1440Q8VFV4 315 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 SmagpQ99KC7 97 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Q9CRC3 126 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Slc50a1Q9CXK4 221 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Rarres2Q9DD06 162 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Vmn1r41Q9EQ44 310 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 AtmQ62388 3066 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Sptbn2Q68FG2 2388 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Zfp456B2RUK9 458 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Gm5239D3YYZ2 122 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Zfp648D3Z0W3 525 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Gm20877J3QPZ4 227 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Lin7cO88952 197 aaKnown RBP8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Gm9Q3UKW5 162 aa8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 Neil3Q8K203 606 aaKnown RBP8.33□□□□□ -1.08
Pcdh1-201ENSMUST00000057185 SpartQ8R1X6 671 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms