RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PFN1P07737 140 aaKnown RBP13.83□□□□□ -0.2
PHGDH-211ENST00000641213 COL8A2P25067 703 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 KLRB1Q12918 225 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 GAMTQ14353 236 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 OR4A5Q8NH83 315 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 TXNDC17Q9BRA2 123 aa13.83□□□□□ -0.2
PHGDH-211ENST00000641213 TRBV23-1A0A0A0MS06 115 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BKO60814 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 NDUFB4O95168 129 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BJP06899 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BOP23527 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 GCHFRP30047 84 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BBP33778 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BDP58876 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BCP62807 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 MLANAQ16655 118 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST2H2BEQ16778 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-211ENST00000641213 TGIF2LXQ8IUE1 241 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 VSTM2AQ8TAG5 236 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 NANPQ8TBE9 248 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BHQ93079 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BNQ99877 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 HIST1H2BMQ99879 126 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 PCGF1Q9BSM1 259 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 DERL1Q9BUN8 251 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 TMEM133Q9H2Q1 129 aa13.82□□□□□ -0.2
PHGDH-211ENST00000641213 INS-IGF2F8WCM5 200 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 H7BYZ3 331 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 ANAPC16Q96DE5 110 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 DOK5Q9P104 306 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 RALYQ9UKM9 306 aaKnown RBP13.81□□□□□ -0.2
PHGDH-211ENST00000641213 PLXNB1O43157 2135 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 TGOLN2O43493 480 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 FOXH1O75593 365 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 HOXA5P20719 270 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 NDUFA6P56556 154 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 ERHP84090 104 aaKnown RBP13.81□□□□□ -0.2
PHGDH-211ENST00000641213 CD69Q07108 199 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 CDSNQ15517 529 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 ZNF672Q499Z4 452 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-211ENST00000641213 NECAP1Q8NC96 275 aa13.81□□□□□ -0.2
PHGDH-211ENST00000641213 YTHDF2Q9Y5A9 579 aaKnown RBP13.81□□□□□ -0.2
PHGDH-211ENST00000641213 NAV3Q8IVL0 2385 aa13.8□□□□□ -0.2
PHGDH-211ENST00000641213 CGB1A6NKQ9 187 aa13.8□□□□□ -0.2
PHGDH-211ENST00000641213 GALR1P47211 349 aa13.8□□□□□ -0.2
PHGDH-211ENST00000641213 ZNF841Q6ZN19 808 aa13.8□□□□□ -0.2
PHGDH-211ENST00000641213 OR4P4Q8NGL7 312 aa13.8□□□□□ -0.2
PHGDH-211ENST00000641213 PYGO2Q9BRQ0 406 aa13.8□□□□□ -0.2
PHGDH-211ENST00000641213 TMEM204Q9BSN7 226 aa13.8□□□□□ -0.2
PHGDH-211ENST00000641213 ZNF430Q9H8G1 570 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-211ENST00000641213 MALRD1Q5VYJ5 2156 aa13.8□□□□□ -0.2
PHGDH-211ENST00000641213 ANKHD1Q8IWZ3 2542 aaKnown RBP13.8□□□□□ -0.2
PHGDH-211ENST00000641213 DLL1O00548 723 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 ACTL6BO94805 426 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 OR10J1P30954 320 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 MC5RP33032 325 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 ADORA2A-AS1P86434 159 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 FAM78BQ5VT40 261 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 MIR17HGQ75NE6 70 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 LINC01551Q86U37 167 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 OR5T1Q8NG75 326 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 FRZBQ92765 325 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 RITA1Q96K30 269 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 ELOVL1Q9BW60 279 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 A0A1W2PN81 502 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 PHOX2AO14813 284 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 CLN5O75503 358 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 IGHV2-70P01814 119 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 SPTA1P02549 2419 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 SMIM6P0DI80 62 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 IL3RAP26951 378 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 CHRNA7P36544 502 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 PPOXP50336 477 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 WT1-ASQ06250 92 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 C10orf55Q5SWW7 151 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 SLC35E1Q96K37 410 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 OR5B12Q96R08 314 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 TCEAL7Q9BRU2 100 aa13.79□□□□□ -0.2
PHGDH-211ENST00000641213 SCO2A0A1W2PP80 73 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 TRGC1P0CF51 173 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 GATA2P23769 480 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-211ENST00000641213 S100PP25815 95 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 DLX1P56177 255 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 CACNG8Q8WXS5 425 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 FUT9Q9Y231 359 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 LRBAP50851 2863 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 SLC25A17O43808 307 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 FSTL3O95633 263 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 MT-CO2P00403 227 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 S100A9P06702 114 aaKnown RBP13.78□□□□□ -0.2
PHGDH-211ENST00000641213 GPX4P36969 197 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-211ENST00000641213 VMA21Q3ZAQ7 101 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 SLC16A13Q7RTY0 426 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 TNFRSF14Q92956 283 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 TPSG1Q9NRR2 321 aa13.78□□□□□ -0.2
PHGDH-211ENST00000641213 AURKAIP1Q9NWT8 199 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-211ENST00000641213 IGHV2-26A0A0B4J1V2 119 aa13.77□□□□□ -0.21
PHGDH-211ENST00000641213 ENSAO43768 121 aaKnown RBP13.77□□□□□ -0.21
PHGDH-211ENST00000641213 CDX1P47902 265 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms