RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 TIMD4Q96H15 378 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 VSIRQ9H7M9 311 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 PINLYPA6NC86 204 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 PAX9P55771 341 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 BET1LQ9NYM9 111 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 CDC42EP3Q9UKI2 254 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 WASHC3Q9Y3C0 194 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 FRYQ5TBA9 3013 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 M0R296 226 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 IGHV3-13P01766 116 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 IGHV3-7P01780 117 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 CENPVQ7Z7K6 275 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-210ENST00000640652 FAM169BQ8N8A8 192 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 OR2D3Q8NGH3 330 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 OPN3Q9H1Y3 402 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-210ENST00000640652 TMEM106BQ9NUM4 274 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 ITGB1BP1O14713 200 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 BTF3P20290 206 aaKnown RBP4.64□□□□□ -1.67
SCN3A-210ENST00000640652 PDLIM4P50479 330 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 MFAP2P55001 183 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 EFNB3Q15768 340 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 OR10J3Q5JRS4 329 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 CRIP3Q6Q6R5 217 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 Q6ZRM9 215 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 TPRX1Q8N7U7 411 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 MS4A5Q9H3V2 200 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 CBLN4Q9NTU7 201 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 CCDC168Q8NDH2 2452 aa4.64□□□□□ -1.67
SCN3A-210ENST00000640652 SCO2A0A1W2PP80 73 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 A8MWL6 223 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 A8MWP6 167 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 C8orf88P0DMB2 117 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 MDKP21741 143 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-210ENST00000640652 MC5RP33032 325 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 CA7P43166 264 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 MDS2Q8NDY4 140 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 TBL2Q9Y4P3 447 aaKnown RBP4.63□□□□□ -1.67
SCN3A-210ENST00000640652 SOX21Q9Y651 276 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-210ENST00000640652 FRYLO94915 3013 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 LINC00869P0C866 280 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 WFDC8Q8IUA0 241 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 RASL11BQ9BPW5 248 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 SPRR3Q9UBC9 169 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 SONP18583 2426 aaKnown RBP4.63□□□□□ -1.67
SCN3A-210ENST00000640652 GRIFINA4D1Z8 144 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 AREGP15514 252 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 NTF4P34130 210 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 VWC2Q2TAL6 325 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 OR4F17Q8NGA8 305 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 NDFIP1Q9BT67 221 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 MAP1LC3CQ9BXW4 147 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 TMEM14BQ9NUH8 114 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 LINC00312Q9Y6C7 94 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 LILRA1O75019 489 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 IL6RP08887 468 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-210ENST00000640652 STAG3L2P0CL84 134 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 STAG3L3P0CL85 134 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 KRTCAP3Q53RY4 240 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 BLNKQ8WV28 456 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 MISP3Q96FF7 219 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF25P17030 456 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-210ENST00000640652 MRPL54Q6P161 138 aaKnown RBP4.63□□□□□ -1.67
SCN3A-210ENST00000640652 FMC1Q96HJ9 113 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 NABP2Q9BQ15 211 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 A0A1B0GV90 55 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 ERVK11-1P61568 191 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 TGIF2LXQ8IUE1 241 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 DEFB108BQ8NET1 73 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 WDR83OSQ9Y284 106 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 GOLT1BQ9Y3E0 138 aa4.63□□□□□ -1.67
SCN3A-210ENST00000640652 A0A0G2JRQ6 117 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 C1QTNF9BB2RNN3 333 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 C9orf172C9J069 976 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 SPINK4O60575 86 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ANOS1P23352 680 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 HBBP68871 147 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 TMEM144Q7Z5S9 345 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 OR4C5Q8NGB2 326 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 PSPNO60542 156 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 SRIP30626 198 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 OR5I1Q13606 314 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ZNF585BQ52M93 769 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 C14orf144Q96I85 54 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 PRDM13Q9H4Q3 707 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 IDI2-AS1Q9NZ38 188 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 H0Y8G0 127 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 CA2P00918 260 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 PRCDQ00LT1 54 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 COA6Q5JTJ3 125 aaKnown RBP4.62□□□□□ -1.67
SCN3A-210ENST00000640652 C12orf54Q6X4T0 127 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ZNRF1Q8ND25 227 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 MIEN1Q9BRT3 115 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 GGTLC1Q9BX51 225 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 OSTCQ9NRP0 149 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 ELOVL5Q9NYP7 299 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 IL17BQ9UHF5 180 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 A0A1W2PRE2 83 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 C15orf62A8K5M9 175 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 TCL1AP56279 114 aa4.62□□□□□ -1.67
SCN3A-210ENST00000640652 TPPP3Q9BW30 176 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms