RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 J3QR06 171 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 CASP6P55212 293 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 OR10W1Q8NGF6 305 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 SARAFQ96BY9 339 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 TMEM106BQ9NUM4 274 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 RNF114Q9Y508 228 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 SRRM4A7MD48 611 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 CA1P00915 261 aaPredicted RBP13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 MGST1P10620 155 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 GNG4P50150 75 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 BATFQ16520 125 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 OR9G1Q8NH87 305 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 SERTAD4Q9NUC0 356 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 TMEM14BQ9NUH8 114 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 PLXNB1O43157 2135 aa13.55□□□□□ -0.24
HNRNPU-228ENST00000640306 HELTA6NFD8 242 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 FAM90A9PA6NNJ1 464 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 A8MXE2 369 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 LINC00869P0C866 280 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 SUMO1P63165 101 aaKnown RBP13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 RPEL1Q2QD12 228 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 PRR31Q5SQ13 230 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 MRPL54Q6P161 138 aaKnown RBP13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 PLSCR4Q9NRQ2 329 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 NAT8BQ9UHF3 227 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 SLC25A15Q9Y619 301 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 ABCA1O95477 2261 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 LGALS4P56470 323 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 KLF3P57682 345 aaPredicted RBP13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 TPPP2P59282 170 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 C1orf162Q8NEQ5 155 aaPredicted RBP13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 PLEKHA3Q9HB20 300 aa13.54□□□□□ -0.24
HNRNPU-228ENST00000640306 TRGV8A0A0C4DH27 118 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 MT-CO2P00403 227 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 DEFB109BQ30KR1 87 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 LBHQ53QV2 105 aaPredicted RBP13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 SEM1Q6ZVN7 128 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 BTF3L4Q96K17 158 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 V9GYV3 84 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 ATMQ13315 3056 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 NAV3Q8IVL0 2385 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 KBTBD11-OT1A0A1B0GTJ5 212 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 A6NNC1 897 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 REG1BP48304 166 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 PRR20EP86478 221 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 PRR20CP86479 221 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 PRR20DP86480 221 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 PRR20BP86481 221 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 PRR20AP86496 221 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 LINC00479Q96M42 142 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 TXNDC17Q9BRA2 123 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 TRAV5A0A0B4J249 113 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 M0R143 59 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 KRTDAPP60985 99 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 MORN5Q5VZ52 161 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 ZCCHC24Q8N2G6 241 aaKnown RBP13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 ZNF503Q96F45 646 aa13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 FOXA2Q9Y261 457 aaPredicted RBP13.53□□□□□ -0.24
HNRNPU-228ENST00000640306 TPRP12270 2363 aaKnown RBP13.52□□□□□ -0.24
HNRNPU-228ENST00000640306 TRGV10A0A0A0MS01 117 aa13.52□□□□□ -0.24
HNRNPU-228ENST00000640306 RAB7AP51149 207 aa13.52□□□□□ -0.24
HNRNPU-228ENST00000640306 MZT1Q08AG7 82 aa13.52□□□□□ -0.24
HNRNPU-228ENST00000640306 GNB4Q9HAV0 340 aa13.52□□□□□ -0.24
HNRNPU-228ENST00000640306 KIR2DL5BA0A0G2JN68 375 aa13.52□□□□□ -0.25
HNRNPU-228ENST00000640306 KIR2DL5BA0A0G2JPC4 375 aa13.52□□□□□ -0.25
HNRNPU-228ENST00000640306 GGTLC3B5MD39 225 aa13.52□□□□□ -0.25
HNRNPU-228ENST00000640306 KIR2DL5AQ8N109 375 aa13.52□□□□□ -0.25
HNRNPU-228ENST00000640306 OR5AU1Q8NGC0 362 aa13.52□□□□□ -0.25
HNRNPU-228ENST00000640306 TRAV17A0A0B4J275 112 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 CGB3P0DN86 165 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 CGB7P0DN87 165 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 KIR2DS2P43631 304 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 ZNF124Q15973 351 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 TPTE2P1Q5T6R2 138 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 C22orf34Q6ZV56 151 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 NEUROG1Q92886 237 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 SSBP3Q9BWW4 388 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 SLC35D1Q9NTN3 355 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 AKAP13Q12802 2813 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 PMCHP20382 165 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 LHFPL4Q7Z7J7 247 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 NEU1Q99519 415 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 SLC45A2Q9UMX9 530 aa13.51□□□□□ -0.25
HNRNPU-228ENST00000640306 SELENOTP62341 195 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 OR2T6Q8NHC8 308 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 RCHY1Q96PM5 261 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 CT45A6P0DMU7 189 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 CT45A5P0DMU8 189 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 CT45A7P0DMV0 189 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 CR1LQ2VPA4 569 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 C11orf52Q96A22 123 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 IL19Q9UHD0 177 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 POLEQ07864 2286 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 PIEZO2Q9H5I5 2752 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 ZNF25P17030 456 aaPredicted RBP13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 SSBP2P81877 361 aaPredicted RBP13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 FBXL7Q9UJT9 491 aa13.5□□□□□ -0.25
HNRNPU-228ENST00000640306 TACC2O95359 2948 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 TEX50A0A1B0GTY4 177 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms