RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 OR2C3Q8N628 320 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 OR1S1Q8NH92 325 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 MARVELD1Q9BSK0 173 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 PLEKHA3Q9HB20 300 aa10.24□□□□□ -0.77
GTF3A-209ENST00000640289 STAB1Q9NY15 2570 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 IGLV11-55A0A075B6I3 123 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 PIGBOS1A0A0B4J2F0 54 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 I3L521 148 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 CCSO14618 274 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 PITX3O75364 302 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 NDUFB8O95169 186 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 PTTG1O95997 202 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 MFAP2P55001 183 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 SPCS3P61009 180 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 ETV3LQ6ZN32 361 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 C12orf45Q8N5I9 185 aaPredicted RBP10.23□□□□□ -0.77
GTF3A-209ENST00000640289 UXS1Q8NBZ7 420 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 OR52E5Q8NH55 327 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 C4orf3Q8WVX3 66 aa10.23□□□□□ -0.77
GTF3A-209ENST00000640289 F11RQ9Y624 299 aaKnown RBP10.23□□□□□ -0.77
GTF3A-209ENST00000640289 TET2Q6N021 2002 aaPredicted RBP10.23□□□□□ -0.77
GTF3A-209ENST00000640289 C13orf42A0A1B0GVH6 325 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 CEBPZOSA8MTT3 80 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 DHFRP00374 187 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 TNFRSF9Q07011 255 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 KLK9Q2XQG4 91 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 PDLIM3Q53GG5 364 aaPredicted RBP10.22□□□□□ -0.77
GTF3A-209ENST00000640289 SLC25A24Q6NUK1 477 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 RAX2Q96IS3 184 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 OR10C1Q96KK4 312 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 OR4F4Q96R69 305 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 P2RX4Q99571 388 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 ENY2Q9NPA8 101 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 HSPB7Q9UBY9 170 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 FBXL7Q9UJT9 491 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 KLK9Q9UKQ9 250 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 S4R3C0 116 aa10.22□□□□□ -0.77
GTF3A-209ENST00000640289 IGHV3-21A0A0B4J1V1 117 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 A0A0G2JLM5 398 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 FAM223BA6NKX1 122 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 INS-IGF2F8WCM5 200 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 PRAF2O60831 178 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 IFNA21P01568 189 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 IGHV3-23P01764 117 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 LGALS1P09382 135 aaKnown RBP10.21□□□□□ -0.77
GTF3A-209ENST00000640289 SLC25A6P12236 298 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 ERHP84090 104 aaKnown RBP10.21□□□□□ -0.77
GTF3A-209ENST00000640289 ATP5G2Q06055 141 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 C15orf32Q32M92 178 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 FAM223AQ8IWN6 122 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 NECAP1Q8NC96 275 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 OR11H1Q8NG94 326 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 USMG5Q96IX5 58 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 RBKSQ9H477 322 aa10.21□□□□□ -0.77
GTF3A-209ENST00000640289 GPN1Q9HCN4 374 aaPredicted RBP10.21□□□□□ -0.77
GTF3A-209ENST00000640289 IGHV4OR15-8A0A075B7B6 117 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 A0A087WW49 117 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 ANKRD34BA5PLL1 514 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 MFSD2BA6NFX1 497 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 PF4P02776 101 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 RNASE2P10153 161 aaKnown RBP10.2□□□□□ -0.78
GTF3A-209ENST00000640289 HIST1H1BP16401 226 aaKnown RBP10.2□□□□□ -0.78
GTF3A-209ENST00000640289 RUNX1Q01196 453 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 EXOSC2Q13868 293 aaKnown RBP10.2□□□□□ -0.78
GTF3A-209ENST00000640289 PRR31Q5SQ13 230 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 MRPL41Q8IXM3 137 aaKnown RBP10.2□□□□□ -0.78
GTF3A-209ENST00000640289 ZNF114Q8NC26 417 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 OR1P1Q8NH06 330 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 DTD1Q8TEA8 209 aa10.2□□□□□ -0.78
GTF3A-209ENST00000640289 HEYLQ9NQ87 328 aaPredicted RBP10.2□□□□□ -0.78
GTF3A-209ENST00000640289 SNRPGP15A8MWD9 76 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 FAM25EA8MYX2 175 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 CCL24O00175 119 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 TRBV12-3P01733 135 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 SNCAP37840 140 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 MYCNOSP40205 109 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 RGS21Q2M5E4 152 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 IAH1Q2TAA2 248 aaPredicted RBP10.19□□□□□ -0.78
GTF3A-209ENST00000640289 ZNF343Q6P1L6 599 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 OR4D5Q8NGN0 318 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 OR1N2Q8NGR9 330 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 MAGT1Q9H0U3 335 aa10.19□□□□□ -0.78
GTF3A-209ENST00000640289 FAM90A26D6RGX4 464 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 IAPPP10997 89 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 FHL3Q13643 280 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 TATDN3Q17R31 274 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 BSXQ3C1V8 233 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 TREML4Q6UXN2 200 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 ZBTB8BQ8NAP8 495 aaPredicted RBP10.18□□□□□ -0.78
GTF3A-209ENST00000640289 OR1L6Q8NGR2 347 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 MISP3Q96FF7 219 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 CCDC140Q96MF4 163 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 HIPK2Q9H2X6 1198 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 THYN1Q9P016 225 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 CACFD1Q9UGQ2 172 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 TRRAPQ9Y4A5 3859 aa10.18□□□□□ -0.78
GTF3A-209ENST00000640289 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.17□□□□□ -0.78
GTF3A-209ENST00000640289 C5orf51A6NDU8 294 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms