RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 C9orf170A2RU37 121 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 RNF222A6NCQ9 220 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 SNRPGP15A8MWD9 76 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 M0R1X1 148 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 OR2J3O76001 311 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 IFNA5P01569 189 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 HLA-AP01891 365 aaKnown RBP6.41□□□□□ -1.38
SCARB2-220ENST00000640076 S100GP29377 79 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 PXDC1Q5TGL8 231 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 ZNF626Q68DY1 528 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 Q6ZRM9 215 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 SGPP2Q8IWX5 399 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 OR4P4Q8NGL7 312 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 RNASE11Q8TAA1 199 aaKnown RBP6.41□□□□□ -1.38
SCARB2-220ENST00000640076 ZNF431Q8TF32 576 aaPredicted RBP6.41□□□□□ -1.38
SCARB2-220ENST00000640076 GALNT14Q96FL9 552 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 TM2D2Q9BX73 214 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 AUP1Q9Y679 476 aa6.41□□□□□ -1.38
SCARB2-220ENST00000640076 TMEM213A2RRL7 107 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 ODF3BA8MYP8 253 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 BUB1B-PAK6H3BSN5 160 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 GOSR2O14653 212 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 CHEK1O14757 476 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 CREBL2O60519 120 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-220ENST00000640076 SFT2D2O95562 160 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 F2RP25116 425 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 CD81P60033 236 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 RPL30P62888 115 aaKnown RBP6.4□□□□□ -1.38
SCARB2-220ENST00000640076 HNF4GQ14541 408 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 TNXAQ16473 311 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 AWAT1Q58HT5 328 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 LDLRAD2Q5SZI1 272 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 C19orf35Q6ZS72 473 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 ZNF833PQ6ZTB9 187 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 PDZD9Q8IXQ8 264 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 SPAG16Q8N0X2 631 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 OR51H1Q8NH63 302 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 TP53RKQ96S44 253 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 S1PR3Q99500 378 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 HSD17B10Q99714 261 aaKnown RBP6.4□□□□□ -1.38
SCARB2-220ENST00000640076 OR51J1Q9H342 316 aa6.4□□□□□ -1.38
SCARB2-220ENST00000640076 C3orf85A0A1B0GTC6 90 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 LINC00473A8K010 186 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 H0Y980 276 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 LY6LH3BQJ8 138 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 DUS4LO95620 317 aaKnown RBP6.4□□□□□ -1.39
SCARB2-220ENST00000640076 IFNA2P01563 188 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 ARG1P05089 322 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 OR5AC1P0C628 307 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 ZP3P21754 424 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.39
SCARB2-220ENST00000640076 UBE2E1P51965 193 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 LINC00205P59089 165 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 UBE2KP61086 200 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 TNFRSF9Q07011 255 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 SP6Q3SY56 376 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 FAM71F2Q6NXP2 309 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 ZNF66Q6ZN08 573 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 CASTOR1Q8WTX7 329 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 MRPL53Q96EL3 112 aaKnown RBP6.4□□□□□ -1.39
SCARB2-220ENST00000640076 MAP1LC3CQ9BXW4 147 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 KCNIP3Q9Y2W7 256 aa6.4□□□□□ -1.39
SCARB2-220ENST00000640076 AMMECR1Q9Y4X0 333 aaPredicted RBP6.4□□□□□ -1.39
SCARB2-220ENST00000640076 NAV3Q8IVL0 2385 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 CENPVL3A0A0U1RRI6 287 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 A0A1W2PRD5 423 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 A0A1W2PRF3 423 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 A0A1W2PRM7 423 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 RNF212BA8MTL3 300 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 J3QLI3 93 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 ANXA3P12429 323 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 PMCHP20382 165 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 IL3RAP26951 378 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 HTR1DP28221 377 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 REG1BP48304 166 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 CATR1Q13166 79 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 DIAPH2-AS1Q14236 149 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 TMEM187Q14656 261 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 TCTEX1D2Q8WW35 142 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 MARC2Q969Z3 335 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 TMEM18Q96B42 140 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 TMEM222Q9H0R3 208 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 TMED3Q9Y3Q3 217 aa6.39□□□□□ -1.39
SCARB2-220ENST00000640076 TCAPO15273 167 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 SSNA1O43805 119 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 CT45A6P0DMU7 189 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 CT45A5P0DMU8 189 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 CT45A7P0DMV0 189 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 THBS3P49746 956 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 BRWD1-AS2P59051 145 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 C12orf45Q8N5I9 185 aaPredicted RBP6.38□□□□□ -1.39
SCARB2-220ENST00000640076 ZNF383Q8NA42 475 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 DDB2Q92466 427 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 ADTRPQ96IZ2 230 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 PHB2Q99623 299 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 MRPL20Q9BYC9 149 aaKnown RBP6.38□□□□□ -1.39
SCARB2-220ENST00000640076 DPM3Q9P2X0 92 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 MMP24Q9Y5R2 645 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 MXRA5Q9NR99 2828 aa6.38□□□□□ -1.39
SCARB2-220ENST00000640076 TRAV40A0A0B4J280 105 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms