RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 OR11H12B2RN74 326 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 ETV2O00321 342 aaPredicted RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 NKX2-8O15522 239 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 SRSF10O75494 262 aaKnown RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 SP1P08047 785 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 ID1P41134 155 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 YPEL3P61236 119 aaPredicted RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 QRFPP83859 136 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 FXYD3Q14802 87 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 TCTEX1D4Q5JR98 221 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 CDCP2Q5VXM1 449 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 OR11H1Q8NG94 326 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 OR11H2Q8NH07 326 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 MAFAQ8NHW3 353 aaPredicted RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 PLPPR1Q8TBJ4 325 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 SPSB4Q96A44 273 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 FAM234AQ9H0X4 552 aa4.78□□□□□ -1.64
SCARB2-218ENST00000639715 PNRC2Q9NPJ4 139 aaKnown RBP4.78□□□□□ -1.64
SCARB2-218ENST00000639715 ICE1Q9Y2F5 2266 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 H3BRM9 83 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 J3QR06 171 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 EFNA2O43921 213 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 PGLYRP1O75594 196 aaPredicted RBP4.77□□□□□ -1.65
SCARB2-218ENST00000639715 APOMO95445 188 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 AMY1AP04745 511 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 SCTP09683 121 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 TMPRSS3P57727 454 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 RNFT1Q5M7Z0 435 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 HAPLN4Q86UW8 402 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 DOLPP1Q86YN1 238 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 TPRX1Q8N7U7 411 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 LSM10Q969L4 123 aaKnown RBP4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GPHA2Q96T91 129 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 HSD17B10Q99714 261 aaKnown RBP4.77□□□□□ -1.65
SCARB2-218ENST00000639715 TTTY12Q9BZ98 90 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 PSG2P11465 335 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 CRYBB3P26998 211 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 EMP1P54849 157 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 RHOBP62745 196 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 TNXAQ16473 311 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 DEFB123Q8N688 67 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 NHLRC2Q8NBF2 726 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 TSKUQ8WUA8 353 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 HES4Q9HCC6 221 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 DYNLRB1Q9NP97 96 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 OBSL1O75147 1896 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 TRAV9-1A0A075B6T8 112 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 TRGV10A0A0A0MS01 117 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE12JA6NER3 117 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 CEACAM18A8MTB9 384 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 PRR33A8MZF0 331 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 PATE3B3GLJ2 98 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 C3orf80F5H4A9 247 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE7O76087 117 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE12FP0CL80 117 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE12GP0CL81 117 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE12IP0CL82 117 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 CTRLP40313 264 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 ATP5G3P48201 142 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE2BQ13066 116 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE4Q13068 117 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE13Q4V321 117 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE2EQ4V326 116 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 PPP1R32Q7Z5V6 425 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 LRTM2Q8N967 370 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 OR10X1Q8NGY0 326 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 UBALD1Q8TB05 177 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 ZNF418Q8TF45 676 aaPredicted RBP4.77□□□□□ -1.65
SCARB2-218ENST00000639715 DAZAP1Q96EP5 407 aaKnown RBP4.77□□□□□ -1.65
SCARB2-218ENST00000639715 EAF1Q96JC9 268 aaPredicted RBP4.77□□□□□ -1.65
SCARB2-218ENST00000639715 C1QTNF5Q9BXJ0 243 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GNB1LQ9BYB4 327 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 GAGE2DQ9UEU5 116 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 SMPXQ9UHP9 88 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 LRRK1Q38SD2 2015 aa4.77□□□□□ -1.65
SCARB2-218ENST00000639715 A0A0A6YYD4 124 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 SNCGO76070 127 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 ERHP84090 104 aaKnown RBP4.76□□□□□ -1.65
SCARB2-218ENST00000639715 ZFP36L1Q07352 338 aaKnown RBP4.76□□□□□ -1.65
SCARB2-218ENST00000639715 SRSF6Q13247 344 aaKnown RBP4.76□□□□□ -1.65
SCARB2-218ENST00000639715 ZIC4Q8N9L1 334 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 OR8A1Q8NGG7 326 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 OCC1Q8TAD7 63 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 PSG8Q9UQ74 426 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 SSUH2Q9Y2M2 353 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 TNRC6AQ8NDV7 1962 aaKnown RBP4.76□□□□□ -1.65
SCARB2-218ENST00000639715 FANCMQ8IYD8 2048 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 H3BVH4 76 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 SSTR5P35346 364 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 ATP5G2Q06055 141 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 MDP1Q86V88 176 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 RBMXL3Q8N7X1 1067 aaKnown RBP4.76□□□□□ -1.65
SCARB2-218ENST00000639715 CDX2Q99626 313 aaPredicted RBP4.76□□□□□ -1.65
SCARB2-218ENST00000639715 REPIN1Q9BWE0 567 aaKnown RBP4.76□□□□□ -1.65
SCARB2-218ENST00000639715 COMMD5Q9GZQ3 224 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 DLL3Q9NYJ7 618 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 ZNF581Q9P0T4 197 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 RNF115Q9Y4L5 304 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 ZDBF2Q9HCK1 2354 aa4.76□□□□□ -1.65
SCARB2-218ENST00000639715 F2RL2O00254 374 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms