RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 ZFP36L2P47974 494 aaKnown RBP11.2□□□□□ -0.62
UBE3A-228ENST00000638155 LOC105371242A0A075B767 164 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 TMEM91Q6ZNR0 172 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 ASCL2Q99929 193 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 SHANK1Q9Y566 2161 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 SCO2A0A1W2PP80 73 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 TCTEX1D4Q5JR98 221 aa11.2□□□□□ -0.62
UBE3A-228ENST00000638155 STHQ8IWL8 128 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 TCF19Q9Y242 345 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FSTP19883 344 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 GFI1BQ5VTD9 330 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 HMGA1P17096 107 aaKnown RBP11.19□□□□□ -0.62
UBE3A-228ENST00000638155 UBE2WQ96B02 151 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 LIFP15018 202 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 UCP2P55851 309 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 TMEM186Q96B77 213 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 TNRC6AQ8NDV7 1962 aaKnown RBP11.19□□□□□ -0.62
UBE3A-228ENST00000638155 TRGV4A0A0C4DH28 118 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A10PA6NDY2 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A18PA6NE21 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A16PA6NEW6 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A20PA6NIJ5 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A8PA6NJQ4 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A7PA6NKC0 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A22PA8MWA6 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A12PA8MX19 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A5PA8MXJ8 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A23PA8MXZ1 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 CGAP01215 116 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 IGHV3-48P01763 117 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 PPBPP02775 128 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A15PP0C7V4 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A13PP0C7W8 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A14PP0C7W9 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 FAM90A24PP0C7X0 464 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 TGIF1Q15583 401 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 DRAM1Q8N682 238 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 C1orf162Q8NEQ5 155 aaPredicted RBP11.19□□□□□ -0.62
UBE3A-228ENST00000638155 AQP3Q92482 292 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 PEMTQ9UBM1 199 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 IGLV3-27P01718 113 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 C16orf47Q6ZP98 133 aaPredicted RBP11.19□□□□□ -0.62
UBE3A-228ENST00000638155 Q9H3A6 140 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 ZNF236Q9UL36 1845 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 A0A1B0GTL3 188 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 ISXQ2M1V0 245 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 NHLRC3Q5JS37 347 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 GTSCR1Q86UQ5 136 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 TMEM167AQ8TBQ9 72 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 CRYGNQ8WXF5 182 aa11.19□□□□□ -0.62
UBE3A-228ENST00000638155 PDLIM4P50479 330 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 PRSS41Q7RTY9 318 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 ATP5L2Q7Z4Y8 100 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 ABHD12Q8N2K0 398 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 UCN2Q96RP3 112 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 SMPXQ9UHP9 88 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 NRN1LQ496H8 165 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 RCC1LQ96I51 464 aaKnown RBP11.18□□□□□ -0.62
UBE3A-228ENST00000638155 IGHV3OR16-13A0A075B7E8 117 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 IGHV3-74A0A0B4J1X5 117 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 ARFGEF1Q9Y6D6 1849 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 PTGDSP41222 190 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 EFNB1P98172 346 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 CHCHD5Q9BSY4 110 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 PTPRDP23468 1912 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 IGHV3-49A0A0A0MS15 119 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 CLPSL1A2RUU4 121 aa11.18□□□□□ -0.62
UBE3A-228ENST00000638155 OR9G1Q8NH87 305 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 PLCE1Q9P212 2302 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 EGR4Q05215 589 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 ZNF625Q96I27 306 aaPredicted RBP11.17□□□□□ -0.62
UBE3A-228ENST00000638155 C5orf66Q9H5L9 145 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 FOXA2Q9Y261 457 aaPredicted RBP11.17□□□□□ -0.62
UBE3A-228ENST00000638155 SPANXCQ9NY87 97 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 ZIC3O60481 467 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 PSCAO43653 123 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 NDUFC2O95298 119 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 EVI2AP22794 236 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 C5orf47Q569G3 176 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 IGHV3-23P01764 117 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 GLRXP35754 106 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 SNHG12Q9BXW3 62 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 A6NNC1 897 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 ERVH48-1M5A8F1 160 aa11.17□□□□□ -0.62
UBE3A-228ENST00000638155 MYOD1P15172 320 aa11.16□□□□□ -0.62
UBE3A-228ENST00000638155 PAPPA2Q9BXP8 1791 aa11.16□□□□□ -0.62
UBE3A-228ENST00000638155 A0A0G2JMM0 328 aa11.16□□□□□ -0.62
UBE3A-228ENST00000638155 CXorf51AA0A1B0GTR3 108 aa11.16□□□□□ -0.62
UBE3A-228ENST00000638155 A0A1W2PPB8 328 aa11.16□□□□□ -0.62
UBE3A-228ENST00000638155 KIR3DP1A8MWS1 328 aa11.16□□□□□ -0.62
UBE3A-228ENST00000638155 Q6ZNB5 142 aa11.16□□□□□ -0.62
UBE3A-228ENST00000638155 IGHV1OR21-1A0A087WYE8 117 aa11.16□□□□□ -0.62
UBE3A-228ENST00000638155 ADMP35318 185 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms