RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 FCGR2BP31994 310 aaPredicted RBP13.29□□□□□ -0.28
CLN5-218ENST00000637397 MRPS18CQ9Y3D5 142 aaKnown RBP13.29□□□□□ -0.28
CLN5-218ENST00000637397 TBR1Q16650 682 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 TMEM42Q69YG0 159 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 GP6Q9HCN6 339 aa13.29□□□□□ -0.28
CLN5-218ENST00000637397 ACACAQ13085 2346 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 TEX38Q6PEX7 206 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 FAM216BQ8N7L0 139 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 NBEAP1P0C6P0 100 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 KIR2DL2P43627 348 aaPredicted RBP13.28□□□□□ -0.28
CLN5-218ENST00000637397 KCNS1Q96KK3 526 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 OR9G9P0C7N8 305 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 EAF1Q96JC9 268 aaPredicted RBP13.28□□□□□ -0.28
CLN5-218ENST00000637397 DERL1Q9BUN8 251 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 ZNF124Q15973 351 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 Q6ZRM9 215 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 FDCSPQ8NFU4 85 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 MYOZ3Q8TDC0 251 aa13.28□□□□□ -0.28
CLN5-218ENST00000637397 COL25A1Q9BXS0 654 aaPredicted RBP13.28□□□□□ -0.28
CLN5-218ENST00000637397 RPL7P18124 248 aaKnown RBP13.27□□□□□ -0.28
CLN5-218ENST00000637397 ATP5IP56385 69 aaPredicted RBP13.27□□□□□ -0.28
CLN5-218ENST00000637397 ABCA1O95477 2261 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 WIPF3A6NGB9 483 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 GOSR1O95249 250 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 SRSF7Q16629 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
CLN5-218ENST00000637397 HEATR1Q9H583 2144 aaKnown RBP13.27□□□□□ -0.29
CLN5-218ENST00000637397 TRAV9-1A0A075B6T8 112 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 PEX7O00628 323 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 GRAMD2BQ96HH9 432 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 DIRC2Q96SL1 478 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 C1RLQ9NZP8 487 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 GLRXP35754 106 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 ECSCRQ19T08 205 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 OR4A5Q8NH83 315 aa13.27□□□□□ -0.29
CLN5-218ENST00000637397 EP400Q96L91 3159 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 SPTAN1Q13813 2472 aaKnown RBP13.26□□□□□ -0.29
CLN5-218ENST00000637397 SPANXN1Q5VSR9 72 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 WDR82Q6UXN9 313 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 ZNF788Q6ZQV5 615 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 TMEM144Q7Z5S9 345 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 LINC01551Q86U37 167 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 OR10AG1Q8NH19 301 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 AP5S1Q9NUS5 200 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 KBTBD11-OT1A0A1B0GTJ5 212 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 ZNF207O43670 478 aaKnown RBP13.26□□□□□ -0.29
CLN5-218ENST00000637397 PSPNO60542 156 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 EFNB3Q15768 340 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 TMEM256Q8N2U0 113 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 OR9G1Q8NH87 305 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 PRDM13Q9H4Q3 707 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 SRSF9Q13242 221 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLN5-218ENST00000637397 TMEM186Q96B77 213 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 LIME1Q9H400 295 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 TMEM265A0A087WTH1 108 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 IGHV2OR16-5A0A0B4J2B6 119 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 DUTP33316 252 aaKnown RBP13.26□□□□□ -0.29
CLN5-218ENST00000637397 MORN2Q502X0 79 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 OSR1Q8TAX0 266 aaPredicted RBP13.26□□□□□ -0.29
CLN5-218ENST00000637397 LAMTOR2Q9Y2Q5 125 aa13.26□□□□□ -0.29
CLN5-218ENST00000637397 PLXNA2O75051 1894 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 C10orf91Q5T1B1 145 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 PRDM6Q9NQX0 595 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 SNAI2O43623 268 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 NUDT3O95989 172 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 TMEM14EPQ6UXP3 125 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 ZNF841Q6ZN19 808 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 CIDEAO60543 219 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 LILRA1O75019 489 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 LIPFP07098 398 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 TFPI2P48307 235 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 TREML4Q6UXN2 200 aa13.25□□□□□ -0.29
CLN5-218ENST00000637397 SSBP4Q9BWG4 385 aaPredicted RBP13.25□□□□□ -0.29
CLN5-218ENST00000637397 HIGD1CA8MV81 97 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 CD33P20138 364 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 GCSHP23434 173 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 HS3ST6Q96QI5 342 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 TIMP3P35625 211 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 SAA2-SAA4A0A096LPE2 208 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 SAA2P0DJI9 122 aaPredicted RBP13.24□□□□□ -0.29
CLN5-218ENST00000637397 C20orf204Q6ZNR8 217 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 GUCD1Q96NT3 240 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 ANAPC10Q9UM13 185 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 IGKV3D-15A0A087WSY6 115 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 FOXF2Q12947 444 aa13.24□□□□□ -0.29
CLN5-218ENST00000637397 YPEL1O60688 119 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 CA1P00915 261 aaPredicted RBP13.23□□□□□ -0.29
CLN5-218ENST00000637397 ACSF3Q4G176 576 aaPredicted RBP13.23□□□□□ -0.29
CLN5-218ENST00000637397 YPEL2Q96QA6 119 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 C15orf61A6NNL5 157 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 TMEM50AO95807 157 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 MGPP08493 103 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 ERASQ7Z444 233 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.23□□□□□ -0.29
CLN5-218ENST00000637397 GGTLC1Q9BX51 225 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 F11RQ9Y624 299 aaKnown RBP13.23□□□□□ -0.29
CLN5-218ENST00000637397 CGB1A6NKQ9 187 aa13.23□□□□□ -0.29
CLN5-218ENST00000637397 FTH1P19P0C7X4 201 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms