RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 PRSS46E5RG02 174 aa16.71■□□□□ 0.27
CLN8-213ENST00000637156 RNASE2P10153 161 aaKnown RBP16.71■□□□□ 0.27
CLN8-213ENST00000637156 AREGP15514 252 aa16.71■□□□□ 0.27
CLN8-213ENST00000637156 UBA52P62987 128 aaKnown RBP16.71■□□□□ 0.27
CLN8-213ENST00000637156 HBG1P69891 147 aa16.71■□□□□ 0.27
CLN8-213ENST00000637156 HBG2P69892 147 aa16.71■□□□□ 0.27
CLN8-213ENST00000637156 LY6EQ16553 131 aa16.71■□□□□ 0.27
CLN8-213ENST00000637156 ETV3LQ6ZN32 361 aa16.71■□□□□ 0.27
CLN8-213ENST00000637156 RASL11BQ9BPW5 248 aa16.71■□□□□ 0.27
CLN8-213ENST00000637156 SLC25A33Q9BSK2 321 aa16.71■□□□□ 0.27
CLN8-213ENST00000637156 FAM103A1Q9BTL3 118 aaKnown RBP16.71■□□□□ 0.27
CLN8-213ENST00000637156 A6NDX4 124 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 AMY1AP04745 511 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 REG1AP05451 166 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 OR8U8P0C7N1 319 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 TPT1P13693 172 aaKnown RBP16.7■□□□□ 0.26
CLN8-213ENST00000637156 SLC38A11Q08AI6 406 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 ALKAL2Q6UX46 152 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 CITED4Q96RK1 184 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 ATP5SQ99766 215 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 ARV1Q9H2C2 271 aa16.7■□□□□ 0.26
CLN8-213ENST00000637156 IGHV7-81A0A0B4J1V7 117 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 IFNA4P05014 189 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 RAB11AP62491 216 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 NDPQ00604 133 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 TUSC1Q2TAM9 212 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 C2orf83Q53S99 150 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 IL17RELQ6ZVW7 336 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 C5orf56Q8N8D9 126 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 SSMEM1Q8WWF3 244 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 ZNF48Q96MX3 618 aaPredicted RBP16.69■□□□□ 0.26
CLN8-213ENST00000637156 P2RX4Q99571 388 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 HLA-DRB1P01911 266 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 IER3P46695 156 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 ATP5IP56385 69 aaPredicted RBP16.69■□□□□ 0.26
CLN8-213ENST00000637156 MED9Q9NWA0 146 aa16.69■□□□□ 0.26
CLN8-213ENST00000637156 BORCS7-ASMTA0A0B4J1R7 106 aa16.68■□□□□ 0.26
CLN8-213ENST00000637156 SH2D7A6NKC9 451 aaPredicted RBP16.68■□□□□ 0.26
CLN8-213ENST00000637156 EGR2P11161 476 aaPredicted RBP16.68■□□□□ 0.26
CLN8-213ENST00000637156 ZNF266Q14584 549 aa16.68■□□□□ 0.26
CLN8-213ENST00000637156 LILRB2Q8N423 598 aa16.68■□□□□ 0.26
CLN8-213ENST00000637156 SCARB1Q8WTV0 552 aa16.68■□□□□ 0.26
CLN8-213ENST00000637156 PINX1Q96BK5 328 aaKnown RBP16.68■□□□□ 0.26
CLN8-213ENST00000637156 HSPB9Q9BQS6 159 aa16.68■□□□□ 0.26
CLN8-213ENST00000637156 DFFBO76075 338 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 IGHV4-59P01825 116 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 Q6YL49 198 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 MOB4Q9Y3A3 225 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 FBXO7Q9Y3I1 522 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 SONP18583 2426 aaKnown RBP16.67■□□□□ 0.26
CLN8-213ENST00000637156 LINC01548A6NM66 108 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 MLANAQ16655 118 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 ATP6V1FQ16864 119 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 C19orf35Q6ZS72 473 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 SMR3AQ99954 134 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 GINS3Q9BRX5 216 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 PRDM13Q9H4Q3 707 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 YAE1D1Q9NRH1 226 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 RFNGQ9Y644 331 aa16.67■□□□□ 0.26
CLN8-213ENST00000637156 ANK3Q12955 4377 aaKnown RBP16.67■□□□□ 0.26
CLN8-213ENST00000637156 NAV3Q8IVL0 2385 aa16.66■□□□□ 0.26
CLN8-213ENST00000637156 FGF16O43320 207 aa16.66■□□□□ 0.26
CLN8-213ENST00000637156 EIF5AP63241 154 aaKnown RBP16.66■□□□□ 0.26
CLN8-213ENST00000637156 VWC2Q2TAL6 325 aa16.66■□□□□ 0.26
CLN8-213ENST00000637156 HSD17B13Q7Z5P4 300 aaPredicted RBP16.66■□□□□ 0.26
CLN8-213ENST00000637156 HSD17B11Q8NBQ5 300 aa16.66■□□□□ 0.26
CLN8-213ENST00000637156 ARPC1AQ92747 370 aa16.66■□□□□ 0.26
CLN8-213ENST00000637156 PHYHIPLQ96FC7 376 aa16.66■□□□□ 0.26
CLN8-213ENST00000637156 SRSF8Q9BRL6 282 aaKnown RBP16.66■□□□□ 0.26
CLN8-213ENST00000637156 FBXO24O75426 580 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 MFAP2P55001 183 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 ASPHD1Q5U4P2 390 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 TMED6Q8WW62 240 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 PLA2G2EQ9NZK7 142 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 PITPNC1Q9UKF7 332 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 SUB1P53999 127 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLN8-213ENST00000637156 PVRIGQ6DKI7 326 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 SPNS3Q6ZMD2 512 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 MRPL41Q8IXM3 137 aaKnown RBP16.65■□□□□ 0.26
CLN8-213ENST00000637156 ZNF114Q8NC26 417 aa16.65■□□□□ 0.26
CLN8-213ENST00000637156 CTRB1P17538 263 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 FAM74A1Q5RGS3 127 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 CTRB2Q6GPI1 263 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 TEX29Q8N6K0 151 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 LFNGQ8NES3 379 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 TMEM147Q9BVK8 224 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 SH3BGRL3Q9H299 93 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 UQCC1Q9NVA1 299 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 DMRT1Q9Y5R6 373 aa16.64■□□□□ 0.25
CLN8-213ENST00000637156 SCAF4O95104 1147 aaKnown RBP16.63■□□□□ 0.25
CLN8-213ENST00000637156 IFNA5P01569 189 aa16.63■□□□□ 0.25
CLN8-213ENST00000637156 MDKP21741 143 aaPredicted RBP16.63■□□□□ 0.25
CLN8-213ENST00000637156 ATP6V0CP27449 155 aa16.63■□□□□ 0.25
CLN8-213ENST00000637156 BLCAPP62952 87 aa16.63■□□□□ 0.25
CLN8-213ENST00000637156 RUNX1Q01196 453 aa16.63■□□□□ 0.25
CLN8-213ENST00000637156 ARSJQ5FYB0 599 aaPredicted RBP16.63■□□□□ 0.25
CLN8-213ENST00000637156 OR1P1Q8NH06 330 aa16.63■□□□□ 0.25
CLN8-213ENST00000637156 ABHD5Q8WTS1 349 aa16.63■□□□□ 0.25
CLN8-213ENST00000637156 GGACTQ9BVM4 153 aa16.63■□□□□ 0.25
CLN8-213ENST00000637156 WDR61Q9GZS3 305 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms