RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SRSF1Q07955 248 aaKnown RBP eCLIP4.72□□□□□ -1.65
SCN1A-209ENST00000635750 SMIM8Q96KF7 97 aa4.72□□□□□ -1.65
SCN1A-209ENST00000635750 SLIRPQ9GZT3 109 aaKnown RBP4.72□□□□□ -1.65
SCN1A-209ENST00000635750 ZMAT4Q9H898 229 aa4.72□□□□□ -1.65
SCN1A-209ENST00000635750 CELA2AP08217 269 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 CIARTQ8N365 385 aaPredicted RBP4.71□□□□□ -1.65
SCN1A-209ENST00000635750 CRIM1Q9NZV1 1036 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 KLK13Q9UKR3 277 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 MPDZO75970 2070 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 PSME4Q14997 1843 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 TGIF1Q15583 401 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 ZNF585BQ52M93 769 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 CDCP2Q5VXM1 449 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 C11orf44Q8N8P7 122 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 GPR146Q96CH1 333 aa4.71□□□□□ -1.65
SCN1A-209ENST00000635750 KLF4O43474 513 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ZG16O60844 167 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 GZMBP10144 247 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 RCC1P18754 421 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-209ENST00000635750 TBR1Q16650 682 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 TRPM7Q96QT4 1865 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 FABP5P3A8MUU1 101 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 APOHP02749 345 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-209ENST00000635750 SAP25Q8TEE9 199 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ABHD17AQ96GS6 310 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 DNAJC30Q96LL9 226 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 GGACTQ9BVM4 153 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 KLF12Q9Y4X4 402 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 TRAV8-4A0A0B4J246 113 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 LOC101059948A0A1B0GTJ6 334 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 LINC01549A6NIU2 74 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 M0R2P5 195 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 NBR2O15453 112 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 HBDP02042 147 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 TNFRSF12AQ9NP84 129 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 CYSLTR1Q9Y271 337 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 SPCS1Q9Y6A9 102 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 PCNX2A6NKB5 2137 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 SHANK3Q9BYB0 1731 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 COX6A1P12074 109 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 GLIPR1P48060 266 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ATXN8Q156A1 80 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ORAOV1Q8WV07 137 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ARFGEF1Q9Y6D6 1849 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 PAX4O43316 350 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 RUNX1Q01196 453 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 SS18Q15532 418 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 SLC25A47Q6Q0C1 308 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ACP7Q6ZNF0 438 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ZNRF1Q8ND25 227 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 CACNG8Q8WXS5 425 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 RNF166Q96A37 237 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-209ENST00000635750 SSBP4Q9BWG4 385 aaPredicted RBP4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ZNF257Q9Y2Q1 563 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 S4R3C0 116 aa4.71□□□□□ -1.66
SCN1A-209ENST00000635750 ZNF407Q9C0G0 2248 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 RPL35AP18077 110 aaKnown RBP4.7□□□□□ -1.66
SCN1A-209ENST00000635750 GCHFRP30047 84 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 TMEM249Q2WGJ8 235 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 OR4D11Q8NGI4 311 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 GBF1Q92538 1859 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 MSGN1A6NI15 193 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 SRD5A1P18405 259 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 PPP1R32Q7Z5V6 425 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 POC1AQ8NBT0 407 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 TMEM30AQ9NV96 361 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 FAM186AA6NE01 2351 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 WNK2Q9Y3S1 2297 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 CXorf65A6NEN9 183 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 IGF2P01344 180 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-209ENST00000635750 DRAM1Q8N682 238 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 TMEM126AQ9H061 195 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 TRAV2A0A0B4J234 112 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 DPRXA6NFQ7 191 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 CA1P00915 261 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-209ENST00000635750 THBDP07204 575 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 FSTP19883 344 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 ORMDL2Q53FV1 153 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 MUC21Q5SSG8 566 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 SIGLEC15Q6ZMC9 328 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 RMI2Q96E14 147 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 RCHY1Q96PM5 261 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 PKIGQ9Y2B9 76 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 ZNHIT1O43257 154 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 IGFBP6P24592 240 aaPredicted RBP4.7□□□□□ -1.66
SCN1A-209ENST00000635750 HIST1H4AP62805 103 aaKnown RBP4.7□□□□□ -1.66
SCN1A-209ENST00000635750 PAX8Q06710 450 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 FAM90A1Q86YD7 464 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 CBLN2Q8IUK8 224 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 SPSB2Q99619 263 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 PARP14Q460N5 1801 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 IGKV1D-42A0A075B6H8 117 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 RPL36AP83881 106 aaKnown RBP4.7□□□□□ -1.66
SCN1A-209ENST00000635750 FAM27E3Q08E93 113 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 KIAA0040Q15053 153 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 OR52E5Q8NH55 327 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 RPL36ALQ969Q0 106 aaKnown RBP4.7□□□□□ -1.66
SCN1A-209ENST00000635750 Q9H3A6 140 aa4.7□□□□□ -1.66
SCN1A-209ENST00000635750 RPP21Q9H633 154 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms