RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 OR5A2Q8NGI9 324 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 OR51L1Q8NGJ5 315 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 OR8S1Q8NH09 359 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF596Q8TC21 504 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 H1FXQ92522 213 aaKnown RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 PYURFQ96I23 114 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ZNF488Q96MN9 340 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 OR5B12Q96R08 314 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 TEAD3Q99594 435 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 NIPSNAP1Q9BPW8 284 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 MICU1Q9BPX6 476 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 HOPXQ9BPY8 73 aaPredicted RBP1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 RERGLQ9H628 205 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 EDA2RQ9HAV5 297 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 RETNQ9HD89 108 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 ARMC1Q9NVT9 282 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 GID8Q9NWU2 228 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 CLN6Q9NWW5 311 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 DNAJC27Q9NZQ0 273 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 BAIAP2Q9UQB8 552 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 LINC00312Q9Y6C7 94 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 U3KQK5 164 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 KIAA2026Q5HYC2 2103 aa1.66□□□□□ -2.14
SMARCB1-208ENST00000634926 LRP1BQ9NZR2 4599 aa1.65□□□□□ -2.14
SMARCB1-208ENST00000634926 DYNC1H1Q14204 4646 aaKnown RBP1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 IGKV1-9A0A0C4DH69 117 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 IGKV1-12A0A0C4DH73 117 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 A6NDN8 102 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 SERPINE3A8MV23 424 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OOSP1A8MZH6 123 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 BUB1B-PAK6H3BSN5 160 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 FGF16O43320 207 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ENTPD6O75354 484 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 RAB3DO95716 219 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 IGKV1D-12P01611 117 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 IGHG2P01859 326 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 HBE1P02100 147 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ARG1P05089 322 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 FABP3P05413 133 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF3P17036 446 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 RCC1P18754 421 aaPredicted RBP1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 F2RP25116 425 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 PSMB8P28062 276 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 HSD11B1P28845 292 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 HAAOP46952 286 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 NUDT2P50583 147 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 BCAP31P51572 246 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF137PP52743 207 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 WNT4P56705 351 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 SMIM11AP58511 58 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 PSME3P61289 254 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ESRRGP62508 458 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 CDK5Q00535 292 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 RUNX1Q01196 453 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 EBI3Q14213 229 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 HLA-DRB5Q30154 266 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 SPIN3Q5JUX0 258 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 TPTE2P1Q5T6R2 138 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 AADACL4Q5VUY2 407 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 GLYATQ6IB77 296 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 FAHD1Q6P587 224 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 HAGHLQ6PII5 290 aaPredicted RBP1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 HEPN1Q6WQI6 88 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 CCDC121Q6ZUS5 278 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 SSX6Q7RTT6 188 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 PGAM4Q8N0Y7 254 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 LINC00471Q8N535 108 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 INO80EQ8NBZ0 244 aaPredicted RBP1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 CCDC54Q8NEL0 328 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR4M1Q8NGD0 313 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR4X2Q8NGF9 303 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR52L1Q8NGH7 329 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR13D1Q8NGV5 346 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR6K6Q8NGW6 343 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR6N2Q8NGY6 317 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR10J6PQ8NGY7 276 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR4S2Q8NH73 311 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 MUC7Q8TAX7 377 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 OR51E1Q8TCB6 317 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 CD300LFQ8TDQ1 290 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 GNPDA2Q8TDQ7 276 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 EEF1AKMT3Q96AZ1 226 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 FAM3DQ96BQ1 224 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ASB9Q96DX5 294 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 RNF170Q96K19 258 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF714Q96N38 554 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 TM2D3Q9BRN9 247 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 TSSK6Q9BXA6 273 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 YIPF3Q9GZM5 350 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 CHST5Q9GZS9 411 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 PBOV1Q9GZY1 135 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 TMEM133Q9H2Q1 129 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ZNF286AQ9HBT8 521 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 GPR84Q9NQS5 396 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 MRM2Q9UI43 246 aaKnown RBP1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 ST3GAL6Q9Y274 331 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 RCL1Q9Y2P8 373 aaKnown RBP1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 HSPE1-MOB4S4R3N1 261 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 DNAH5Q8TE73 4624 aa1.65□□□□□ -2.15
SMARCB1-208ENST00000634926 TMEM269A0A1B0GVZ9 245 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms