RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 NOTOA8MTQ0 251 aa11.41□□□□□ -0.58
PDLIM3-213ENST00000629667 ZNF818PQ6ZRF7 136 aa11.41□□□□□ -0.58
PDLIM3-213ENST00000629667 HRH4Q9H3N8 390 aa11.41□□□□□ -0.58
PDLIM3-213ENST00000629667 DAPK2Q9UIK4 370 aa11.41□□□□□ -0.58
PDLIM3-213ENST00000629667 FAT2Q9NYQ8 4349 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 IGHV3OR16-13A0A075B7E8 117 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 IGHV3-74A0A0B4J1X5 117 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 MARCH11A6NNE9 402 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 C15orf61A6NNL5 157 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 SNAPC5O75971 98 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 MED14OSP0DP75 135 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 AQP4P55087 323 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 FAM90A2PQ658T7 463 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 TCF24Q7RTU0 167 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 TMEM17Q86X19 198 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 HOGA1Q86XE5 327 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 CENPSQ8N2Z9 138 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 OR10C1Q96KK4 312 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 TMEM56Q96MV1 263 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 OR51B2Q9Y5P1 312 aa11.4□□□□□ -0.58
PDLIM3-213ENST00000629667 DNAH2Q9P225 4427 aa11.4□□□□□ -0.59
PDLIM3-213ENST00000629667 PKHD1P08F94 4074 aa11.4□□□□□ -0.59
PDLIM3-213ENST00000629667 CD5P06127 495 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 EIF4EP06730 217 aaKnown RBP11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 FCER2P06734 321 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 LEMD1Q68G75 181 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 Q8NAQ8 132 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 LGALS14Q8TCE9 139 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 BORCS5Q969J3 196 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 SLC25A46Q96AG3 418 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 DGCR14Q96DF8 476 aaKnown RBP11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 RHBDL2Q9NX52 303 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 NSG2Q9Y328 171 aa11.39□□□□□ -0.59
PDLIM3-213ENST00000629667 MUC4Q99102 2169 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 TRAV18A0A075B6X5 111 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 DFFBO76075 338 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 KRASP01116 189 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 HLA-DMBP28068 263 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 MFAP4P55083 255 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 DEFB131AP59861 70 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 HERV-K104P61576 105 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 STHQ8IWL8 128 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 TSPAN14Q8NG11 270 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 GIMAP1Q8WWP7 306 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 MISP3Q96FF7 219 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 ZNF414Q96IQ9 312 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 GINS3Q9BRX5 216 aa11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 NXF2Q9GZY0 626 aaKnown RBP11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 RRP15Q9Y3B9 282 aaKnown RBP11.38□□□□□ -0.59
PDLIM3-213ENST00000629667 IGHV4-4A0A075B6R2 117 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 TRAV10A0A0B4J240 114 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 A0A1B0GVY2 172 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 ST8SIA3O43173 380 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 RLN1P04808 185 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 F2RP25116 425 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 GNRHRP30968 328 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 RPL11P62913 178 aaKnown RBP11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 TPRA1Q86W33 373 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 OR1P1Q8NH06 330 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 TXN2Q99757 166 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 MS4A6AQ9H2W1 248 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 TXNL4BQ9NX01 149 aaKnown RBP11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 FKBP11Q9NYL4 201 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 PRNDQ9UKY0 176 aa11.37□□□□□ -0.59
PDLIM3-213ENST00000629667 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 GNG7O60262 68 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 RBMY1A1P0DJD3 496 aaKnown RBP11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 RBMY1CP0DJD4 496 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 G6PCP35575 357 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 LPAR6P43657 344 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 RBMY1FQ15415 496 aaKnown RBP11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 SFXN4Q6P4A7 337 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 Q6ZTC4 211 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 OR5AP2Q8NGF4 316 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 FCAMRQ8WWV6 532 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 ST8SIA2Q92186 375 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 BLOC1S6Q9UL45 172 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 AGRNO00468 2067 aa11.36□□□□□ -0.59
PDLIM3-213ENST00000629667 PRSS29PA6NIE9 313 aa11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 I3L2K1 104 aa11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 IGHV3-48P01763 117 aa11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 MIFP14174 115 aa11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 FGF9P31371 208 aaPredicted RBP11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 PVRIGQ6DKI7 326 aa11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 CADM3Q8N126 398 aa11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 DUSP18Q8NEJ0 188 aa11.35□□□□□ -0.59
PDLIM3-213ENST00000629667 DNAH17Q9UFH2 4485 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 TRAV2A0A0B4J234 112 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 IGHV3-66A0A0C4DH42 116 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 PGLYRP1O75594 196 aaPredicted RBP11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 MT-CO2P00403 227 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 CBX5P45973 191 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 FAM24BQ8N5W8 94 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 PINX1Q96BK5 328 aaKnown RBP11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 TSC22D3Q99576 134 aa11.34□□□□□ -0.59
PDLIM3-213ENST00000629667 RNF126Q9BV68 326 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms