RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 OR10W1Q8NGF6 305 aa7.7□□□□□ -1.18
SOX2-OT-249ENST00000628810 MYOZ3Q8TDC0 251 aa7.7□□□□□ -1.18
SOX2-OT-249ENST00000628810 C2orf50Q96LR7 162 aa7.7□□□□□ -1.18
SOX2-OT-249ENST00000628810 FYTTD1Q96QD9 318 aaKnown RBP7.7□□□□□ -1.18
SOX2-OT-249ENST00000628810 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
SOX2-OT-249ENST00000628810 PLEKHA3Q9HB20 300 aa7.7□□□□□ -1.18
SOX2-OT-249ENST00000628810 LINC00527Q9UJ94 153 aa7.7□□□□□ -1.18
SOX2-OT-249ENST00000628810 WSB1Q9Y6I7 421 aa7.7□□□□□ -1.18
SOX2-OT-249ENST00000628810 TENM1Q9UKZ4 2725 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 LY86O95711 162 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 ELANEP08246 267 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 NKX2-1P43699 371 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 HOXA1P49639 335 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 H2BFSP57053 126 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 RRAS2P62070 204 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 CXorf66Q5JRM2 361 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 PVRIGQ6DKI7 326 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 TEX38Q6PEX7 206 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 C10orf99Q6UWK7 81 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 OR2C3Q8N628 320 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 ASB13Q8WXK3 278 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 NMES1Q9C002 83 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 MED28Q9H204 178 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 RBKSQ9H477 322 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 SLA2Q9H6Q3 261 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 MGAT4CQ9UBM8 478 aa7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 TET2Q6N021 2002 aaPredicted RBP7.69□□□□□ -1.18
SOX2-OT-249ENST00000628810 TNCP24821 2201 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 TRBV9A0A0B4J1U6 114 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 C13orf42A0A1B0GVH6 325 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 C5orf51A6NDU8 294 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 FAM25EA8MYX2 175 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 SYNGR2O43760 224 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 MED6O75586 246 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 APELAP0DMC3 54 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 OR13C7P0DN81 318 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 CXCL3P19876 107 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 KRTAP10-3P60369 221 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 CYCSP99999 105 aaKnown RBP7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 FCN2Q15485 313 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 SPINK9Q5DT21 86 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 TCTEX1D4Q5JR98 221 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 CENPVQ7Z7K6 275 aaPredicted RBP7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 ZNF329Q86UD4 541 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 OR11H7Q8NGC8 314 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 OR4X2Q8NGF9 303 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 OR1L6Q8NGR2 347 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 OR1P1Q8NH06 330 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 DTD1Q8TEA8 209 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 FANCD2OSQ96PS1 177 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 HINT2Q9BX68 163 aa7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 RCL1Q9Y2P8 373 aaKnown RBP7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 F11RQ9Y624 299 aaKnown RBP7.68□□□□□ -1.18
SOX2-OT-249ENST00000628810 IGLV11-55A0A075B6I3 123 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 FAM223BA6NKX1 122 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 CEBPZOSA8MTT3 80 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 NXPH3O95157 252 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 SIX6O95475 246 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 MBPP02686 304 aaPredicted RBP7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 REG1AP05451 166 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 RNASE2P10153 161 aaKnown RBP7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 HIST1H1BP16401 226 aaKnown RBP7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 MFAP2P55001 183 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 ATP5IP56385 69 aaPredicted RBP7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 POLR2GP62487 172 aaKnown RBP eCLIP7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 ERHP84090 104 aaKnown RBP7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 CD83Q01151 205 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 C19orf35Q6ZS72 473 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 FAM223AQ8IWN6 122 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 OR5T1Q8NG75 326 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 OR5AU1Q8NGC0 362 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 CIB3Q96Q77 187 aaPredicted RBP7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 P2RX4Q99571 388 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 CITED1Q99966 193 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 C11orf1Q9H5F2 150 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 ENY2Q9NPA8 101 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 GSKIPQ9P0R6 139 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 DMRT1Q9Y5R6 373 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 PLXNB1O43157 2135 aa7.67□□□□□ -1.18
SOX2-OT-249ENST00000628810 K7EPK0 472 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 CYB5BO43169 146 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 HTR2BP41595 481 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 RAB9AP51151 201 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 TAS2R30P59541 319 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 KIAA0141Q14154 515 aaPredicted RBP7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 C2orf83Q53S99 150 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 C11orf87Q6NUJ2 197 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 NECAP1Q8NC96 275 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 SLC24A4Q8NFF2 622 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 CHAC2Q8WUX2 184 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 TMEM170AQ8WVE7 144 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 RAB40CQ96S21 281 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 ZNF747Q9BV97 191 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 MAGT1Q9H0U3 335 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 KLK15Q9H2R5 256 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 HIPK2Q9H2X6 1198 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 HEYLQ9NQ87 328 aaPredicted RBP7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 ZFP57Q9NU63 452 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 U3KQ87 197 aa7.66□□□□□ -1.18
SOX2-OT-249ENST00000628810 CORTO00230 105 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms