RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ENY2Q9NPA8 101 aa11.46□□□□□ -0.57
PNKP-221ENST00000627317 ZFP57Q9NU63 452 aa11.46□□□□□ -0.57
PNKP-221ENST00000627317 CYB5BO43169 146 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 NXPH3O95157 252 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 SLC25A6P12236 298 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 CTRB1P17538 263 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 SPCS3P61009 180 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 WT1-ASQ06250 92 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 AARDQ4LEZ3 155 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 CTRB2Q6GPI1 263 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 C19orf35Q6ZS72 473 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 KLHL30-AS1Q8NEE0 82 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
PNKP-221ENST00000627317 TGP01266 2768 aa11.44□□□□□ -0.58
PNKP-221ENST00000627317 CEBPZOSA8MTT3 80 aa11.44□□□□□ -0.58
PNKP-221ENST00000627317 PRH1P02810 166 aa11.44□□□□□ -0.58
PNKP-221ENST00000627317 CRYGCP07315 174 aa11.44□□□□□ -0.58
PNKP-221ENST00000627317 ERHP84090 104 aaKnown RBP11.44□□□□□ -0.58
PNKP-221ENST00000627317 RHOGP84095 191 aa11.44□□□□□ -0.58
PNKP-221ENST00000627317 MYOZ3Q8TDC0 251 aa11.44□□□□□ -0.58
PNKP-221ENST00000627317 DNAH3Q8TD57 4116 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 C13orf42A0A1B0GVH6 325 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 FAM223BA6NKX1 122 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 SNRPGP15A8MWD9 76 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 BRI3O95415 125 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 HIST1H1BP16401 226 aaKnown RBP11.43□□□□□ -0.58
PNKP-221ENST00000627317 CDX1P47902 265 aaPredicted RBP11.43□□□□□ -0.58
PNKP-221ENST00000627317 DEFA5Q01523 94 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 DEFA6Q01524 100 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 TNFRSF9Q07011 255 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 FAM223AQ8IWN6 122 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 OR2C3Q8N628 320 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 ZNF491Q8N8L2 437 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 UBE2E2Q96LR5 201 aa11.43□□□□□ -0.58
PNKP-221ENST00000627317 F11RQ9Y624 299 aaKnown RBP11.43□□□□□ -0.58
PNKP-221ENST00000627317 A0A0G2JLM5 398 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 MPTX1A8MV57 137 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 FAM25EA8MYX2 175 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 CCSO14618 274 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 OR2J3O76001 311 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 SNCAP37840 140 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 IAH1Q2TAA2 248 aaPredicted RBP11.42□□□□□ -0.58
PNKP-221ENST00000627317 PDLIM3Q53GG5 364 aaPredicted RBP11.42□□□□□ -0.58
PNKP-221ENST00000627317 KPRPQ5T749 579 aaPredicted RBP11.42□□□□□ -0.58
PNKP-221ENST00000627317 C18orf65Q6ZTR6 163 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 NECAP1Q8NC96 275 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 OR4F17Q8NGA8 305 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 OR1L6Q8NGR2 347 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 C4orf3Q8WVX3 66 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 USMG5Q96IX5 58 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 OR5B12Q96R08 314 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 OR4F4Q96R69 305 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 GNB4Q9HAV0 340 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 HEYLQ9NQ87 328 aaPredicted RBP11.42□□□□□ -0.58
PNKP-221ENST00000627317 HSPB7Q9UBY9 170 aa11.42□□□□□ -0.58
PNKP-221ENST00000627317 IGLV11-55A0A075B6I3 123 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 TRBV9A0A0B4J1U6 114 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 C5orf51A6NDU8 294 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 FAM90A26D6RGX4 464 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 INS-IGF2F8WCM5 200 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 SSNA1O43805 119 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 PITX3O75364 302 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 IGHV3-11P01762 117 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 ATP5G2Q06055 141 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 KIAA0141Q14154 515 aaPredicted RBP11.41□□□□□ -0.58
PNKP-221ENST00000627317 TATDN3Q17R31 274 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 SAMD5Q5TGI4 173 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 SLC25A24Q6NUK1 477 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 C8orf86Q6ZUL3 223 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 ZNF114Q8NC26 417 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 OR1P1Q8NH06 330 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 DTD1Q8TEA8 209 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 P2RX4Q99571 388 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 RBKSQ9H477 322 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 THYN1Q9P016 225 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 FBXL7Q9UJT9 491 aa11.41□□□□□ -0.58
PNKP-221ENST00000627317 MED6O75586 246 aa11.4□□□□□ -0.58
PNKP-221ENST00000627317 PF4P02776 101 aa11.4□□□□□ -0.58
PNKP-221ENST00000627317 LGALS1P09382 135 aaKnown RBP11.4□□□□□ -0.58
PNKP-221ENST00000627317 SUB1P53999 127 aaKnown RBP eCLIP11.4□□□□□ -0.58
PNKP-221ENST00000627317 EXOSC2Q13868 293 aaKnown RBP11.4□□□□□ -0.58
PNKP-221ENST00000627317 C15orf32Q32M92 178 aa11.4□□□□□ -0.58
PNKP-221ENST00000627317 BEAN1Q3B7T3 259 aa11.4□□□□□ -0.58
PNKP-221ENST00000627317 ZBTB8BQ8NAP8 495 aaPredicted RBP11.4□□□□□ -0.58
PNKP-221ENST00000627317 OR10C1Q96KK4 312 aa11.4□□□□□ -0.58
PNKP-221ENST00000627317 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
PNKP-221ENST00000627317 HIPK2Q9H2X6 1198 aa11.4□□□□□ -0.58
PNKP-221ENST00000627317 GSKIPQ9P0R6 139 aa11.4□□□□□ -0.58
PNKP-221ENST00000627317 C7orf66A4D0T2 115 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 G3V4G9 280 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 WRBO00258 174 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 NDUFB8O95169 186 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 SCGB1D2O95969 90 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 HTR2BP41595 481 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 NKX2-1P43699 371 aaPredicted RBP11.39□□□□□ -0.59
PNKP-221ENST00000627317 OXA1LQ15070 435 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 DEFB136Q30KP8 78 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 GSG1LQ6UXU4 331 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 C1QL4Q86Z23 238 aa11.39□□□□□ -0.59
PNKP-221ENST00000627317 OR4D5Q8NGN0 318 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms