RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 OR2J1Q9GZK6 312 aa9.53□□□□□ -0.88
LINC00538-201ENST00000626109 PATZ1Q9HBE1 687 aaKnown RBP9.53□□□□□ -0.88
LINC00538-201ENST00000626109 MPC1Q9Y5U8 109 aa9.53□□□□□ -0.88
LINC00538-201ENST00000626109 TRBV6-6A0A0A6YYG2 114 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 C7orf77A4D0Y5 90 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 FAM24AA6NFZ4 105 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 TCF21O43680 179 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 C8orf88P0DMB2 117 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 COL8A1P27658 744 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 CKS1BP61024 79 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF672Q499Z4 452 aaPredicted RBP9.52□□□□□ -0.88
LINC00538-201ENST00000626109 AWAT1Q58HT5 328 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 DPPA3Q6W0C5 159 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 ZNF818PQ6ZRF7 136 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 GAPTQ8N292 157 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 SSMEM1Q8WWF3 244 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 HPSE2Q8WWQ2 592 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 CLCC1Q96S66 551 aa9.52□□□□□ -0.88
LINC00538-201ENST00000626109 PRR14LQ5THK1 2151 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 TINCRA0A1B0GVN0 87 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 OR5B21A6NL26 309 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 SEC14L6B5MCN3 397 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 E7EQL1 145 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 K7N7A8 449 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 SSSCA1O60232 199 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 SCTP09683 121 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 SLC25A6P12236 298 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 FABP6P51161 128 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 CLINT1Q14677 625 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 TMEM252Q8N6L7 170 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 SUMF2Q8NBJ7 301 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 KLF14Q8TD94 323 aaPredicted RBP9.52□□□□□ -0.89
LINC00538-201ENST00000626109 SFT2D1Q8WV19 159 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 NEUROG1Q92886 237 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 SH3BGRL3Q9H299 93 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 C11orf1Q9H5F2 150 aa9.52□□□□□ -0.89
LINC00538-201ENST00000626109 CISD1Q9NZ45 108 aaKnown RBP9.52□□□□□ -0.89
LINC00538-201ENST00000626109 CENPVL3A0A0U1RRI6 287 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 G3V4G9 280 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 HBE1P02100 147 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 SELEP16581 610 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 LMO1P25800 156 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 ATP6V0CP27449 155 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 MOB3BQ86TA1 216 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 ZNF383Q8NA42 475 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 HIST1H2BAQ96A08 127 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 P2RX4Q99571 388 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 SCRT1Q9BWW7 348 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 FZR1Q9UM11 496 aa9.51□□□□□ -0.89
LINC00538-201ENST00000626109 A0A1B0GU03 582 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 IGSF23A1L1A6 192 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 RBFOX3A6NFN3 312 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 CD300LBA8K4G0 201 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 CCL24O00175 119 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 HSD17B6O14756 317 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 OR4A8P0C604 315 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 METTL15P1P0C7V9 234 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 SRD5A1P18405 259 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 DUTP33316 252 aaKnown RBP9.5□□□□□ -0.89
LINC00538-201ENST00000626109 MPV17P39210 176 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 LGALS7P47929 136 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 KLF3P57682 345 aaPredicted RBP9.5□□□□□ -0.89
LINC00538-201ENST00000626109 NMSQ5H8A3 153 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 AKR1C8PQ5T2L2 129 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 Q6ZPA2 131 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 OR5P3Q8WZ94 311 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 RBMXL1Q96E39 390 aaKnown RBP9.5□□□□□ -0.89
LINC00538-201ENST00000626109 SEBOXQ9HB31 216 aaPredicted RBP9.5□□□□□ -0.89
LINC00538-201ENST00000626109 DUSP13Q9UII6 198 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 FBXO7Q9Y3I1 522 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 LRRK2Q5S007 2527 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 PGLYRP1O75594 196 aaPredicted RBP9.5□□□□□ -0.89
LINC00538-201ENST00000626109 MDH2P40926 338 aaKnown RBP9.5□□□□□ -0.89
LINC00538-201ENST00000626109 SLC35B1P78383 322 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 PSG7Q13046 419 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 MSMPQ1L6U9 139 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 OR2T2Q6IF00 324 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 GCSAMQ8N6F7 178 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 OR5C1Q8NGR4 320 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 CCL28Q9NRJ3 127 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 OR2W1Q9Y3N9 320 aa9.5□□□□□ -0.89
LINC00538-201ENST00000626109 IGLV3-9A0A075B6K5 115 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 H3BTX0 84 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 OR13C7P0DN81 318 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 F2RP25116 425 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 KIR3DS1Q14943 382 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 MOB1BQ7L9L4 216 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 Q8IYB0 196 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 THAP8Q8NA92 274 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 TMEM170AQ8WVE7 144 aa9.49□□□□□ -0.89
LINC00538-201ENST00000626109 HEATR1Q9H583 2144 aaKnown RBP9.49□□□□□ -0.89
LINC00538-201ENST00000626109 HELZ2Q9BYK8 2649 aaKnown RBP9.49□□□□□ -0.89
LINC00538-201ENST00000626109 A0A1W2PPR1 153 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 IQCF6A8MYZ5 107 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 DEGS1O15121 323 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 IFNA1P01562 189 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 IFNA17P01571 189 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 IGHV3-13P01766 116 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 RAB5AP20339 215 aa9.48□□□□□ -0.89
LINC00538-201ENST00000626109 DDTP30046 118 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms