RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 BAIAP2Q9UQB8 552 aa1.34□□□□□ -2.19
CDR1-202ENST00000625883 LHFPL6Q9Y693 200 aa1.34□□□□□ -2.19
CDR1-202ENST00000625883 SMARCA4P51532 1647 aa1.34□□□□□ -2.2
CDR1-202ENST00000625883 CCDC88CQ9P219 2028 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 TRBV6-5A0A0K0K1A5 114 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 RPP14O95059 124 aaKnown RBP1.33□□□□□ -2.2
CDR1-202ENST00000625883 CLPSP04118 112 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 TCRBP04435 133 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 NFYAP23511 347 aaPredicted RBP1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST1H2BOP23527 126 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST1H2BBP33778 126 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST1H2BDP58876 126 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST1H2BCP62807 126 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 RANP62826 216 aaKnown RBP1.33□□□□□ -2.2
CDR1-202ENST00000625883 AESQ08117 197 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST2H2BEQ16778 126 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.33□□□□□ -2.2
CDR1-202ENST00000625883 DHFR2Q86XF0 187 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 ZNF565Q8N9K5 539 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 ZNF439Q8NDP4 499 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 OR8B3Q8NGG8 313 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST1H2BHQ93079 126 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 C8orf76Q96K31 380 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST1H2BNQ99877 126 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 HIST1H2BMQ99879 126 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 NIPSNAP1Q9BPW8 284 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 C11orf68Q9H3H3 251 aaKnown RBP1.33□□□□□ -2.2
CDR1-202ENST00000625883 PRTFDC1Q9NRG1 225 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 OTOGLQ3ZCN5 2332 aa1.33□□□□□ -2.2
CDR1-202ENST00000625883 MEIKINA0A087WXM9 373 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 ZFYVE9O95405 1425 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 CRPP02741 224 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 CDKN2CP42773 168 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 OMPP47874 163 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 EIF2B2P49770 351 aaKnown RBP1.32□□□□□ -2.2
CDR1-202ENST00000625883 CEBPGP53567 150 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 DEFA1P59665 94 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 NNATQ16517 81 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 LPCAT3Q6P1A2 487 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 RPL22L1Q6P5R6 122 aaKnown RBP1.32□□□□□ -2.2
CDR1-202ENST00000625883 Q6ZSA8 131 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 DEFB119Q8N690 84 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 ANKRD29Q8N6D5 301 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 RASSF5Q8WWW0 418 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 MBD3L1Q8WWY6 194 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 DCUN1D1Q96GG9 259 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 TSPAN32Q96QS1 320 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 UCK1Q9HA47 277 aa1.32□□□□□ -2.2
CDR1-202ENST00000625883 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.32□□□□□ -2.2
CDR1-202ENST00000625883 PQLC2LA1A4F0 135 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 TRAPPC13A5PLN9 417 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 OR4C46A6NHA9 309 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 TTRP02766 147 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 OR13C4Q8NGS5 318 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 PPP1R14BQ96C90 147 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 HECW2Q9P2P5 1572 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 NUP155O75694 1391 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 TONSLQ96HA7 1378 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 A0A087WUJ7 227 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 TRAV26-2A0A0B4J265 109 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 FAM236DA0A1B0GTK5 79 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 SMIM9A6NGZ8 99 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 GOLGA6L19H0YKK7 550 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 E2F6O75461 281 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 CNIH1O95406 144 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 FAM236CP0DP71 79 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 RUNX1Q01196 453 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 ZNF345Q14585 488 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 ELOBQ15370 118 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 PFN4Q8NHR9 129 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 C11orf40Q8WZ69 217 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 ULBP3Q9BZM4 244 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 COMMD5Q9GZQ3 224 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 TMEM56-RWDD3S4R434 201 aa1.31□□□□□ -2.2
CDR1-202ENST00000625883 IGKV2-29A2NJV5 120 aaPredicted RBP1.3□□□□□ -2.2
CDR1-202ENST00000625883 DPRXA6NFQ7 191 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 F8W036 122 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 SDCBPO00560 298 aaPredicted RBP1.3□□□□□ -2.2
CDR1-202ENST00000625883 PMP2P02689 132 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 RPSAP08865 295 aaKnown RBP1.3□□□□□ -2.2
CDR1-202ENST00000625883 NDUFA5Q16718 116 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 SPOPLQ6IQ16 392 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 MCFD2Q8NI22 146 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 H1FXQ92522 213 aaKnown RBP1.3□□□□□ -2.2
CDR1-202ENST00000625883 TMEM106AQ96A25 262 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 TOMM6Q96B49 74 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 CYSTM1Q9H1C7 97 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 OR51V1Q9H2C8 321 aa1.3□□□□□ -2.2
CDR1-202ENST00000625883 GLI3P10071 1580 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 EXOC1LA0A1B0GW35 172 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 METTL15P1P0C7V9 234 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 G6PCP35575 357 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 STX5Q13190 355 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 SPANXN3Q5MJ09 141 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 LCN15Q6UWW0 184 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 BPIFA4PQ86YQ2 179 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 TERB2Q8NHR7 220 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 TMEM147Q9BVK8 224 aa1.29□□□□□ -2.2
CDR1-202ENST00000625883 HEATR5AQ86XA9 2040 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms