RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 NRN1LQ496H8 165 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 GMPPAQ96IJ6 420 aaPredicted RBP11.47□□□□□ -0.57
UBE3A-209ENST00000625778 S1PR3Q99500 378 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 FAM173AQ9BQD7 235 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 NPVFQ9HCQ7 196 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 ZNF331Q9NQX6 463 aaPredicted RBP11.47□□□□□ -0.57
UBE3A-209ENST00000625778 FBLL1A6NHQ2 334 aaKnown RBP11.47□□□□□ -0.57
UBE3A-209ENST00000625778 GFRA3O60609 400 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 IGHV3-48P01763 117 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 RAB31Q13636 194 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 PMCHL1Q16048 86 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 MLANAQ16655 118 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 UTF1Q5T230 341 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 STUMQ69YW2 141 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 RAB1CQ92928 201 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 NCOR1P1Q9H4R4 102 aa11.47□□□□□ -0.57
UBE3A-209ENST00000625778 CEP192Q8TEP8 1941 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 BMPR1BO00238 502 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 APCSP02743 223 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 TNFSF4P23510 183 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 NPY1RP25929 384 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 IBA57Q5T440 356 aaKnown RBP11.46□□□□□ -0.57
UBE3A-209ENST00000625778 Q8N976 141 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 CNEP1R1Q8N9A8 125 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 CORO2AQ92828 525 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 SLC45A2Q9UMX9 530 aa11.46□□□□□ -0.57
UBE3A-209ENST00000625778 CHTOPQ9Y3Y2 248 aaKnown RBP11.46□□□□□ -0.57
UBE3A-209ENST00000625778 CA2P00918 260 aa11.46□□□□□ -0.58
UBE3A-209ENST00000625778 DUTP33316 252 aaKnown RBP11.46□□□□□ -0.58
UBE3A-209ENST00000625778 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.58
UBE3A-209ENST00000625778 ZNF439Q8NDP4 499 aa11.46□□□□□ -0.58
UBE3A-209ENST00000625778 OR2D3Q8NGH3 330 aa11.46□□□□□ -0.58
UBE3A-209ENST00000625778 FAM168AQ92567 244 aa11.46□□□□□ -0.58
UBE3A-209ENST00000625778 CLEC7AQ9BXN2 247 aa11.46□□□□□ -0.58
UBE3A-209ENST00000625778 CDC42EP3Q9UKI2 254 aa11.46□□□□□ -0.58
UBE3A-209ENST00000625778 HSBP1L1C9JCN9 74 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 PROP1O75360 226 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 MFAP2P55001 183 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 Q0VG73 95 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 SLC24A4Q8NFF2 622 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 TSKUQ8WUA8 353 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 ZNF355PQ9NSJ1 428 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 M0R2Z0 102 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 MPDU1O75352 247 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 CD24P25063 80 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 PRRX1P54821 245 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 SLAQ13239 276 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 TCTEX1D1Q8N7M0 179 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 TMEM105Q8N8V8 129 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 MAFAQ8NHW3 353 aaPredicted RBP11.45□□□□□ -0.58
UBE3A-209ENST00000625778 KLF14Q8TD94 323 aaPredicted RBP11.45□□□□□ -0.58
UBE3A-209ENST00000625778 ORAOV1Q8WV07 137 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 CLEC5AQ9NY25 188 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 SH3BGRL2Q9UJC5 107 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 A0A1W2PN81 502 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 SH2D7A6NKC9 451 aaPredicted RBP11.45□□□□□ -0.58
UBE3A-209ENST00000625778 K7ESF4 209 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
UBE3A-209ENST00000625778 LHFPL4Q7Z7J7 247 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 MCRIP2Q9BUT9 160 aaKnown RBP11.45□□□□□ -0.58
UBE3A-209ENST00000625778 GNB1LQ9BYB4 327 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 DUSP13Q9UII6 198 aa11.45□□□□□ -0.58
UBE3A-209ENST00000625778 CACNA1GO43497 2377 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 KMT2EQ8IZD2 1858 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 M0R296 226 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 TRIP6Q15654 476 aaKnown RBP11.44□□□□□ -0.58
UBE3A-209ENST00000625778 TNXAQ16473 311 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 SLC35E4Q6ICL7 350 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 TRAT1Q6PIZ9 186 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 NIT1Q86X76 327 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 LRRC29Q8WV35 223 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 SFXN3Q9BWM7 321 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 BOD1L1Q8NFC6 3051 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 PRB4P10163 310 aaPredicted RBP11.44□□□□□ -0.58
UBE3A-209ENST00000625778 TSPOP30536 169 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 MPV17L2Q567V2 206 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 WDR73Q6P4I2 378 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 KLHDC1Q8N7A1 406 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 ZNRF1Q8ND25 227 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 NABP2Q9BQ15 211 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 ARL2-SNX15V9GYD0 113 aa11.44□□□□□ -0.58
UBE3A-209ENST00000625778 TRAV5A0A0B4J249 113 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 HOXC12P31275 282 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 CX3CL1P78423 397 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 EIF4EBP1Q13541 118 aaPredicted RBP11.43□□□□□ -0.58
UBE3A-209ENST00000625778 C6orf15Q6UXA7 325 aaPredicted RBP11.43□□□□□ -0.58
UBE3A-209ENST00000625778 ACP7Q6ZNF0 438 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 CDX2Q99626 313 aaPredicted RBP11.43□□□□□ -0.58
UBE3A-209ENST00000625778 TRGV10A0A0A0MS01 117 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 IGHV2OR16-5A0A0B4J2B6 119 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.43□□□□□ -0.58
UBE3A-209ENST00000625778 PLAUP00749 431 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 CTRLP40313 264 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 C1orf159Q96HA4 380 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 GSX1Q9H4S2 264 aaPredicted RBP11.43□□□□□ -0.58
UBE3A-209ENST00000625778 TNRC6AQ8NDV7 1962 aaKnown RBP11.43□□□□□ -0.58
UBE3A-209ENST00000625778 AMY1AP04745 511 aa11.43□□□□□ -0.58
UBE3A-209ENST00000625778 VDAC2P45880 294 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms