RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	TYMS	P04818	313 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	RFPL3S	P0C7P2	107 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	TUBGCP6	Q96RT7	1819 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672		A0A1B0GV72	72 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	FHIT	P49789	147 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	ATP5I	P56385	69 aa	Predicted RBP	11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672	LINC00158	P58513	81 aa		11.71	□□□□□ -0.53
NRXN1-222	ENST00000625672		H0YL77	283 aa		11.71	□□□□□ -0.54
NRXN1-222	ENST00000625672	CGA	P01215	116 aa		11.71	□□□□□ -0.54
NRXN1-222	ENST00000625672	IGFBP2	P18065	325 aa		11.71	□□□□□ -0.54
NRXN1-222	ENST00000625672		A0A1B0GUT8	65 aa		11.71	□□□□□ -0.54
NRXN1-222	ENST00000625672	MESP2	Q0VG99	397 aa		11.71	□□□□□ -0.54
NRXN1-222	ENST00000625672	AQP3	Q92482	292 aa		11.71	□□□□□ -0.54
NRXN1-222	ENST00000625672		Q96M66	194 aa		11.71	□□□□□ -0.54
NRXN1-222	ENST00000625672	FANCM	Q8IYD8	2048 aa		11.71	□□□□□ -0.54
NRXN1-222	ENST00000625672	SNAI2	O43623	268 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	TTC9C	Q8N5M4	171 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	OR52E5	Q8NH55	327 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	JPT2	Q9H910	190 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	SELENOK	Q9Y6D0	94 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	CHD5	Q8TDI0	1954 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	SDHC	Q99643	169 aa	Predicted RBP	11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	THADA	Q6YHU6	1953 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	C19orf67	A6NJJ6	358 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	C17orf100	A8MU93	164 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	CD28	P10747	220 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	CYB5R2	Q6BCY4	276 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672		Q9H3A6	140 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	ZDBF2	Q9HCK1	2354 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	IGLV1-36	A0A0B4J1U3	117 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	KBTBD11-OT1	A0A1B0GTJ5	212 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	IGKV1D-42	A0A075B6H8	117 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672	TBR1	Q16650	682 aa		11.7	□□□□□ -0.54
NRXN1-222	ENST00000625672		A0A0U1RRA0	63 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672		F8WEM9	126 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	RIPPLY3	P57055	190 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	YLPM1	P49750	1951 aa	Known RBP	11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	COL11A1	P12107	1806 aa	Predicted RBP	11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	NHSL1	Q5SYE7	1610 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672		A0A1B0GWB2	263 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	WNT2	P09544	360 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	CBLN1	P23435	193 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	SEPSECS	Q9HD40	501 aa	Known RBP	11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	ZXDC	Q2QGD7	858 aa	Predicted RBP	11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	KLF4	O43474	513 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	TRGV11	A0A075B6L2	103 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	FBLN7	Q53RD9	439 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	SIRT4	Q9Y6E7	314 aa	Predicted RBP	11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	CACNA1G	O43497	2377 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	RHOG	P84095	191 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	SPSB2	Q99619	263 aa		11.69	□□□□□ -0.54
NRXN1-222	ENST00000625672	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	RPL32	P62910	135 aa	Known RBP	11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	PSMG4	Q5JS54	123 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	NPCDR1	Q9BY65	106 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	LOC102723996	A0A087X1L8	192 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	IGHV1-2	P23083	117 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	DSCR9	P59020	149 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	FAM166A	Q6J272	317 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	RPP21	Q9H633	154 aa	Known RBP	11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	ABCA7	Q8IZY2	2146 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	MTURN	Q8N3F0	131 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	SLC25A2	Q9BXI2	301 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	CRIM1	Q9NZV1	1036 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	LINC00312	Q9Y6C7	94 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	GGTLC3	B5MD39	225 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	CTSB	P07858	339 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	ALX4	Q9H161	411 aa	Predicted RBP	11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	EDA2R	Q9HAV5	297 aa		11.68	□□□□□ -0.54
NRXN1-222	ENST00000625672	IGHV3-64	A0A075B6Q5	118 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	ORMDL3	Q8N138	153 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	CMC4	P56277	68 aa	Predicted RBP	11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	RND3	P61587	244 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	ASPHD2	Q6ICH7	369 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	TRBV5-5	A0A0J9YX44	114 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672		J3QW42	95 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	CXCL2	P19875	107 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	CEACAM8	P31997	349 aa	Predicted RBP	11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	ZP1	P60852	638 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	ADAMTSL1	Q8N6G6	1762 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	TRAV2	A0A0B4J234	112 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	LHX2	P50458	406 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	EGR4	Q05215	589 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	KIF13B	Q9NQT8	1826 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	CIART	Q8N365	385 aa	Predicted RBP	11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	C5orf66	Q9H5L9	145 aa		11.67	□□□□□ -0.54
NRXN1-222	ENST00000625672	LYNX1	G3V0Z9	82 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	LYNX1	P0DP58	116 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	LIMS1	P48059	325 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	TMEM187	Q14656	261 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	IGHV3-73	A0A0B4J1V6	119 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	DPRX	A6NFQ7	191 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	CELA3B	P08861	270 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	SPACA3	Q8IXA5	215 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	GATD1	Q8NB37	220 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	ASCL2	Q99929	193 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	CEP290	O15078	2479 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	INS-IGF2	F8WCM5	200 aa		11.66	□□□□□ -0.54
NRXN1-222	ENST00000625672	NAPSA	O96009	420 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms