RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y C11orf45Q8TAV5 145 aa11.94□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y MOB3AQ96BX8 217 aa11.94□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y BSCL2Q96G97 398 aaPredicted RBP11.94□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y RARRES2Q99969 163 aa11.94□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y ZNF2Q9BSG1 426 aaPredicted RBP11.94□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y CHRDL1Q9BU40 450 aa11.94□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y COMMD9Q9P000 198 aa11.94□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y MPTX1A8MV57 137 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y NDUFA4O00483 81 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y IFNA4P05014 189 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y SERPINE2P07093 398 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y TRAPPC2P0DI81 140 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y TRAPPC2BP0DI82 140 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y NAT1P18440 290 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y RFX2P48378 723 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y ERVK-16P61578 105 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y RBMS2Q15434 407 aaKnown RBP11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y ZNF124Q15973 351 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y Q56UQ5 140 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y THOC7Q6I9Y2 204 aaKnown RBP11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y SPSB3Q6PJ21 355 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y OR5H2Q8NGV7 314 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y CSTL1Q9H114 145 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y IGKV3-7A0A075B6H7 116 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y TEX50A0A1B0GTY4 177 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y PMP2P02689 132 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y PRSS3P35030 304 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y WT1-ASQ06250 92 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y SCARB1Q8WTV0 552 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y SLC25A46Q96AG3 418 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y MFFQ9GZY8 342 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y KMT2AQ03164 3969 aa11.92□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y IGHV3-49A0A0A0MS15 119 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y K7EMT4 169 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y PGLYRP1O75594 196 aaPredicted RBP11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y YIF1AO95070 293 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y RLN1P04808 185 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y F2RP25116 425 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y HSD17B13Q7Z5P4 300 aaPredicted RBP11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y CMTM1Q8IZ96 169 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y OR1L8Q8NGR8 309 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y OR11H2Q8NH07 326 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y GATAD1Q8WUU5 269 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y RNF2Q99496 336 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y SMIM31A0A1B0GVY4 71 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y MARCH11A6NNE9 402 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y C15orf62A8K5M9 175 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y GPR31O00270 319 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y DEFB4AO15263 64 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y ADMP35318 185 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y MFAP2P55001 183 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y PRR20EP86478 221 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y PRR20CP86479 221 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y PRR20DP86480 221 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y PRR20BP86481 221 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y PRR20AP86496 221 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y OR6F1Q8NGZ6 308 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y DGCR14Q96DF8 476 aaKnown RBP11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y CMTM3Q96MX0 182 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y FXYD6Q9H0Q3 95 aa11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y F11RQ9Y624 299 aaKnown RBP11.9□□□□□ -0.5
CD99-211ENST00000623253_PAR_Y DNAH10Q8IVF4 4471 aa11.9□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y APOA1P02647 267 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y EIF4EP06730 217 aaKnown RBP11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y HLA-DMAP28067 261 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y HRH1P35367 487 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y CMC4P56277 68 aaPredicted RBP11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y LYSMD2Q8IV50 215 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y CADM3Q8N126 398 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y GBGT1Q8N5D6 347 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y TMEM116Q8NCL8 245 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y GPX8Q8TED1 209 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y C2CD4CQ8TF44 421 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y LSM10Q969L4 123 aaKnown RBP11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y COMMD3Q9UBI1 195 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y NSG2Q9Y328 171 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y OR51B2Q9Y5P1 312 aa11.89□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y IGHV3OR16-13A0A075B7E8 117 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y IGHV3-74A0A0B4J1X5 117 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y IGHV7-4-1A0A0J9YVY3 117 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y F8W735 103 aaPredicted RBP11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y CHEK1O14757 476 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y SNAPC5O75971 98 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y S100GP29377 79 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y LPAR6P43657 344 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y TSPAN5P62079 268 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y NCS1P62166 190 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y LPCAT3Q6P1A2 487 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y FUNDC2Q9BWH2 189 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y SCPEP1Q9HB40 452 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y NDUFA4L2Q9NRX3 87 aa11.88□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y K7EIM0 57 aa11.87□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y NUPL2O15504 423 aaKnown RBP11.87□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y CA1P00915 261 aaPredicted RBP11.87□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y KRASP01116 189 aa11.87□□□□□ -0.51
CD99-211ENST00000623253_PAR_Y CTSGP08311 255 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms