RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 RSG1Q9BU20 258 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 IGKV3-7A0A075B6H7 116 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 H0YIZ8 118 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 M0QZK8 103 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 OR10J1P30954 320 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 KLF17Q5JT82 389 aaPredicted RBP10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 FAM71F2Q6NXP2 309 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 BPIFCQ8NFQ6 507 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 OR11H6Q8NGC7 330 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 OR4A5Q8NH83 315 aa10.09□□□□□ -0.79
SCAMP1-207ENST00000621999 CD99P14209 185 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 LOXL1Q08397 574 aaPredicted RBP10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 DEFB112Q30KQ8 113 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 IGKV1-39P01597 117 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 IGHV3-11P01762 117 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 IGKV1D-39P04432 117 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 CGB3P0DN86 165 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 CGB7P0DN87 165 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 HSD17B13Q7Z5P4 300 aaPredicted RBP10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 COMMD7Q86VX2 200 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 ADGRG4Q8IZF6 3080 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 M0R036 132 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 CORTO00230 105 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 HBE1P02100 147 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 MBP02144 154 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 SNRPCP09234 159 aaKnown RBP10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 RELBQ01201 579 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 PAX5Q02548 391 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 ZNF674Q2M3X9 581 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 IL34Q6ZMJ4 242 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 OR1L6Q8NGR2 347 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 TMEM167AQ8TBQ9 72 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 Q8WTZ3 238 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 C17orf50Q8WW18 174 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 FBXL7Q9UJT9 491 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 MDFIC2A0A1B0GVS7 189 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 ATP6V0CP27449 155 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 B2MP61769 119 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 SLC7A5P1Q8MH63 180 aa10.08□□□□□ -0.8
SCAMP1-207ENST00000621999 TRAV14DV4A0A0A6YYC5 116 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 SRRM4A7MD48 611 aaKnown RBP10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 TEX261Q6UWH6 196 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 OR4X1Q8NH49 305 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 C8orf46Q8TAG6 207 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 RNF126Q9BV68 326 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 COL12A1Q99715 3063 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 M0QZ24 198 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 FCN1O00602 326 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 ATP6V1G1O75348 118 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 TAS2R45P59539 299 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 ZNF329Q86UD4 541 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 ZNF439Q8NDP4 499 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 OR4D5Q8NGN0 318 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 OR10G4Q8NGN3 311 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 OR10G9Q8NGN4 311 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 OR10G7Q8NGN6 311 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 OR5R1Q8NH85 324 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 RNF5Q99942 180 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 SIRPDQ9H106 197 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 TPSG1Q9NRR2 321 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 GNG13Q9P2W3 67 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 PRCDQ00LT1 54 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 SLC16A13Q7RTY0 426 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 HSPB7Q9UBY9 170 aa10.07□□□□□ -0.8
SCAMP1-207ENST00000621999 IGLV1-47P01700 117 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 MFAP4P55083 255 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 ATP5G2Q06055 141 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 HAGHQ16775 308 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 FAM78BQ5VT40 261 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 JMJD8Q96S16 334 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 RAI1Q7Z5J4 1906 aaPredicted RBP10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 IGHV4-59P01825 116 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 UBE2G2P60604 165 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 AQP10Q96PS8 301 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 IGHV3OR16-8A0A075B7F1 116 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 EIF3GO75821 320 aaKnown RBP eCLIP10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 COMPP49747 757 aaPredicted RBP10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 LY6G5BQ8NDX9 201 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 GAB2Q9UQC2 676 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 DBX1A6NMT0 343 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 AP4M1O00189 453 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 PITX3O75364 302 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 MAS1LP35410 378 aa10.06□□□□□ -0.8
SCAMP1-207ENST00000621999 FSTL3O95633 263 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 VDAC2P45880 294 aaPredicted RBP10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 PPT1P50897 306 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 ZNF345Q14585 488 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 A0A1W2PRX2 142 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 ZNF785A8K8V0 405 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 HOXA3O43365 443 aaPredicted RBP10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 APOC3P02656 99 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 FGF8P55075 233 aaPredicted RBP10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 MIC13Q5XKP0 118 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 UMAD1C9J7I0 102 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 AREGP15514 252 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 PRSS57Q6UWY2 283 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 SIGLECL1Q8N7X8 197 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 TMEM68Q96MH6 324 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 PPP1R14DQ9NXH3 145 aa10.05□□□□□ -0.8
SCAMP1-207ENST00000621999 FOXA2Q9Y261 457 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms