RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GLT8D1Q68CQ7 371 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 WDR59Q6PJI9 974 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 RASL11AQ6T310 242 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 TEX261Q6UWH6 196 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 LYPD2Q6UXB3 125 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 MARCH3Q86UD3 253 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 C1orf174Q8IYL3 243 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 TMEM158Q8WZ71 300 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 TM2D3Q9BRN9 247 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 OR2J1Q9GZK6 312 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 WDR61Q9GZS3 305 aaKnown RBP2.36□□□□□ -2.03
BRCA1-229ENST00000621897 CXorf21Q9HAI6 301 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 OR5AC2Q9NZP5 309 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF492Q9P255 531 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 TAC3Q9UHF0 121 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF706Q9Y5V0 76 aaPredicted RBP2.36□□□□□ -2.03
BRCA1-229ENST00000621897 PLXND1Q9Y4D7 1925 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 HIVEP2P31629 2446 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 TMEM2Q9UHN6 1383 aa2.36□□□□□ -2.03
BRCA1-229ENST00000621897 FANCMQ8IYD8 2048 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 DISP2A7MBM2 1401 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 ARHGAP31Q2M1Z3 1444 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 SPATA31E1Q6ZUB1 1445 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 CAMSAP2Q08AD1 1489 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 IGHV1-45A0A0A0MS14 117 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 ARRDC5A6NEK1 342 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 DPRXA6NFQ7 191 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 LY6LH3BQJ8 138 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 J3QQQ9 107 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 COX7A2LO14548 114 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 OR7C2O60412 319 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 TNFSF13O75888 250 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 GABARAPO95166 117 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 SMIM17P0DL12 118 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF83P51522 516 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 TAS2R20P59543 309 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 DEFA3P59666 94 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 PKIAP61925 76 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 HBA1P69905 142 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 SLC38A11Q08AI6 406 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 EIF3IQ13347 325 aaKnown RBP2.35□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF181Q2M3W8 571 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 Q5XG85 94 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 EBLN2Q6P2I7 272 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 GUSBP11Q6P575 273 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 CROCCP2Q86T23 111 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 WDR86Q86TI4 376 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 PRR15Q8IV56 129 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 C8orf59Q8N0T1 100 aaPredicted RBP2.35□□□□□ -2.03
BRCA1-229ENST00000621897 OR8A1Q8NGG7 326 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 OR4C16Q8NGL9 310 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 OR5H2Q8NGV7 314 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 SGMS2Q8NHU3 365 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 FAM57AQ8TBR7 257 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 CMBLQ96DG6 245 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 SLAMF6Q96DU3 332 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 CARD19Q96LW7 228 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 SPIN2AQ99865 258 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 SPIN2BQ9BPZ2 258 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 PSMG3Q9BT73 122 aaPredicted RBP2.35□□□□□ -2.03
BRCA1-229ENST00000621897 C11orf68Q9H3H3 251 aaKnown RBP2.35□□□□□ -2.03
BRCA1-229ENST00000621897 CST9LQ9H4G1 147 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF230Q9UIE0 474 aaPredicted RBP2.35□□□□□ -2.03
BRCA1-229ENST00000621897 TNFSF18Q9UNG2 199 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 CEP170Q5SW79 1584 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 SBF1O95248 1867 aa2.35□□□□□ -2.03
BRCA1-229ENST00000621897 ADAMTS13Q76LX8 1427 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 PDS5BQ9NTI5 1447 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 GRIN2AQ12879 1464 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 TET2Q6N021 2002 aaPredicted RBP2.34□□□□□ -2.03
BRCA1-229ENST00000621897 AKAP12Q02952 1782 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 TRBV20OR9-2A0A075B6H5 130 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 IGLV1-50A0A075B6I6 118 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 TRAV9-1A0A075B6T8 112 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 IZUMO1RA6ND01 250 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 IGLL5B9A064 214 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 CLDN25C9JDP6 229 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 M0R143 59 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 NCR2O95944 276 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 IGLV2-23P01705 113 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 GPX1P07203 203 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 CRISP2P16562 243 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 FGF7P21781 194 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 DAPP51397 102 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 COPZ1P61923 177 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 FKBP1AP62942 108 aaKnown RBP2.34□□□□□ -2.03
BRCA1-229ENST00000621897 LY6EQ16553 131 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 LYRM7Q5U5X0 104 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 AMMECR1LQ6DCA0 310 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 CEMP1Q6PRD7 247 aaPredicted RBP2.34□□□□□ -2.03
BRCA1-229ENST00000621897 ZNF695Q8IW36 515 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 TCTEX1D1Q8N7M0 179 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 SLC25A29Q8N8R3 303 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 TERB2Q8NHR7 220 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 RPS4Y2Q8TD47 263 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 HIST1H2BAQ96A08 127 aa2.34□□□□□ -2.03
BRCA1-229ENST00000621897 GPX7Q96SL4 187 aaPredicted RBP2.34□□□□□ -2.03
BRCA1-229ENST00000621897 SLC25A21Q9BQT8 299 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms