RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 B4DSR2 109 aa17.15■□□□□ 0.34
SPAST-204ENST00000621856 KRBOX1C9JBD0 128 aa17.15■□□□□ 0.34
SPAST-204ENST00000621856 COMMD1Q8N668 190 aa17.15■□□□□ 0.34
SPAST-204ENST00000621856 TREM1Q9NP99 234 aa17.15■□□□□ 0.34
SPAST-204ENST00000621856 FCN1O00602 326 aa17.14■□□□□ 0.33
SPAST-204ENST00000621856 NDUFA3O95167 84 aa17.14■□□□□ 0.33
SPAST-204ENST00000621856 REG1AP05451 166 aa17.14■□□□□ 0.33
SPAST-204ENST00000621856 DEFB113Q30KQ7 82 aa17.14■□□□□ 0.33
SPAST-204ENST00000621856 ACSM6Q6P461 480 aa17.14■□□□□ 0.33
SPAST-204ENST00000621856 TMEM231Q9H6L2 316 aa17.14■□□□□ 0.33
SPAST-204ENST00000621856 PLXNB1O43157 2135 aa17.14■□□□□ 0.33
SPAST-204ENST00000621856 IGHV3OR16-10A0A075B7F0 116 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 IGLC7A0M8Q6 106 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 FNDC10F2Z333 226 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 CNIH1O95406 144 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 TMEM11P17152 192 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 BRS3P32247 399 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 RAB2AP61019 212 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 FBLN7Q53RD9 439 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 LFNGQ8NES3 379 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 SFT2D1Q8WV19 159 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 AJUBAQ96IF1 538 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 P2RX4Q99571 388 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 IGHV1-69DA0A0B4J2H0 117 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 IGHV1-69P01742 117 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 HBE1P02100 147 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 MBP02144 154 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 SRSF3P84103 164 aaKnown RBP17.13■□□□□ 0.33
SPAST-204ENST00000621856 PIP4P2Q8N4L2 257 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 SRSF12Q8WXF0 261 aaKnown RBP17.13■□□□□ 0.33
SPAST-204ENST00000621856 FAM96BQ9Y3D0 163 aa17.13■□□□□ 0.33
SPAST-204ENST00000621856 USP9YO00507 2555 aaPredicted RBP17.12■□□□□ 0.33
SPAST-204ENST00000621856 TRAV40A0A0B4J280 105 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 NCBP2LA6PVI3 153 aaKnown RBP17.12■□□□□ 0.33
SPAST-204ENST00000621856 FAM106CPP0CH98 169 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 APELAP0DMC3 54 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 CD69Q07108 199 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 EBI3Q14213 229 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 C5orf64Q2M2E5 130 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 RUSC1-AS1Q66K80 236 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 SPSB3Q6PJ21 355 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 TEPPQ6URK8 271 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 MGST2Q99735 147 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 C7orf69Q9H7B7 122 aa17.12■□□□□ 0.33
SPAST-204ENST00000621856 ANKRD17O75179 2603 aaKnown RBP17.12■□□□□ 0.33
SPAST-204ENST00000621856 AREGP15514 252 aa17.11■□□□□ 0.33
SPAST-204ENST00000621856 LRRC75A-AS1Q8N1F1 130 aa17.11■□□□□ 0.33
SPAST-204ENST00000621856 Q8N6K4 173 aa17.11■□□□□ 0.33
SPAST-204ENST00000621856 RNASEH2CQ8TDP1 164 aaKnown RBP17.11■□□□□ 0.33
SPAST-204ENST00000621856 ABHD5Q8WTS1 349 aa17.11■□□□□ 0.33
SPAST-204ENST00000621856 RCC1LQ96I51 464 aaKnown RBP17.11■□□□□ 0.33
SPAST-204ENST00000621856 GGTLC1Q9BX51 225 aa17.11■□□□□ 0.33
SPAST-204ENST00000621856 HIF1ANQ9NWT6 349 aa17.11■□□□□ 0.33
SPAST-204ENST00000621856 TRAV20A0A0B4J274 112 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 BTBD17A6NE02 478 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 SSBP2P81877 361 aaPredicted RBP17.1■□□□□ 0.33
SPAST-204ENST00000621856 RAB31Q13636 194 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 ACOT6Q3I5F7 207 aaPredicted RBP17.1■□□□□ 0.33
SPAST-204ENST00000621856 FAM120AOSQ5T036 256 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 SLC16A13Q7RTY0 426 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 OR10G4Q8NGN3 311 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 OR10G9Q8NGN4 311 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 OR10G7Q8NGN6 311 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 KCNIP2Q9NS61 270 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 LSM4Q9Y4Z0 139 aaKnown RBP17.1■□□□□ 0.33
SPAST-204ENST00000621856 TEX22C9J3V5 150 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 GPX4P36969 197 aaPredicted RBP17.1■□□□□ 0.33
SPAST-204ENST00000621856 OPRK1P41145 380 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 ZNF726P1Q15940 193 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 GUK1Q16774 197 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 LCN15Q6UWW0 184 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 SSMEM1Q8WWF3 244 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 CACNG8Q8WXS5 425 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 SLC35E1Q96K37 410 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 PBDC1Q9BVG4 233 aa17.1■□□□□ 0.33
SPAST-204ENST00000621856 ASH1LQ9NR48 2969 aaKnown RBP17.1■□□□□ 0.33
SPAST-204ENST00000621856 FBN2P35556 2912 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 SOX15O60248 233 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 CCL20P78556 96 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 GAMTQ14353 236 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 MLANAQ16655 118 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 LINC01356Q8N9X3 169 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 C1orf159Q96HA4 380 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 PSMG3-AS1Q96PY0 264 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 EIF5A2Q9GZV4 153 aaKnown RBP17.09■□□□□ 0.33
SPAST-204ENST00000621856 PXMP4Q9Y6I8 212 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 NAV3Q8IVL0 2385 aa17.09■□□□□ 0.33
SPAST-204ENST00000621856 A0A096LNT2 108 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 TMEM218A2RU14 115 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 M6PRP20645 277 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 FXYD3Q14802 87 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 HIST2H2BCQ6DN03 193 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 FAM122CQ6P4D5 195 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 BRD3OSQ6XYD6 125 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 TMEM144Q7Z5S9 345 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 RPP25LQ8N5L8 163 aaKnown RBP17.08■□□□□ 0.32
SPAST-204ENST00000621856 ZNF114Q8NC26 417 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 MBD3L1Q8WWY6 194 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 MISP3Q96FF7 219 aa17.08■□□□□ 0.32
SPAST-204ENST00000621856 SRSF8Q9BRL6 282 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms