RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 FAM74A7A6NL05 159 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 DFFBO76075 338 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 OR10J1P30954 320 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 FAM74A3Q4VXF1 159 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 BCL6BQ8N143 479 aaPredicted RBP8.47□□□□□ -1.05
VPS11-208ENST00000621676 RPP25LQ8N5L8 163 aaKnown RBP8.47□□□□□ -1.05
VPS11-208ENST00000621676 OR10G4Q8NGN3 311 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 OR10G9Q8NGN4 311 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 OR10G7Q8NGN6 311 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 LSM10Q969L4 123 aaKnown RBP8.47□□□□□ -1.05
VPS11-208ENST00000621676 MARVELD3Q96A59 401 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 REG4Q9BYZ8 158 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 PARP11Q9NR21 331 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 DPM3Q9P2X0 92 aa8.47□□□□□ -1.05
VPS11-208ENST00000621676 ZNF727A8MUV8 499 aa8.46□□□□□ -1.05
VPS11-208ENST00000621676 RND2P52198 227 aa8.46□□□□□ -1.05
VPS11-208ENST00000621676 MEF2CQ06413 473 aaPredicted RBP8.46□□□□□ -1.05
VPS11-208ENST00000621676 SRSF7Q16629 238 aaKnown RBP eCLIP8.46□□□□□ -1.05
VPS11-208ENST00000621676 GUK1Q16774 197 aa8.46□□□□□ -1.05
VPS11-208ENST00000621676 ZFP82Q8N141 532 aa8.46□□□□□ -1.05
VPS11-208ENST00000621676 BLNKQ8WV28 456 aa8.46□□□□□ -1.05
VPS11-208ENST00000621676 NEU4Q8WWR8 484 aaPredicted RBP8.46□□□□□ -1.05
VPS11-208ENST00000621676 RPS10P5Q9NQ39 176 aa8.46□□□□□ -1.05
VPS11-208ENST00000621676 A0A1B0GW64 132 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 A0A1B0GWJ7 208 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 IL6RP08887 468 aaPredicted RBP8.46□□□□□ -1.06
VPS11-208ENST00000621676 ARSJQ5FYB0 599 aaPredicted RBP8.46□□□□□ -1.06
VPS11-208ENST00000621676 FAM78BQ5VT40 261 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 RAB39BQ96DA2 213 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 SEPSECSQ9HD40 501 aaKnown RBP8.46□□□□□ -1.06
VPS11-208ENST00000621676 A0A1W2PPI3 338 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 MFSD2BA6NFX1 497 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 NDUFA2O43678 99 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 OR7C2O60412 319 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 ATF4P18848 351 aaPredicted RBP8.46□□□□□ -1.06
VPS11-208ENST00000621676 NPBWR1P48145 328 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 CIARTQ8N365 385 aaPredicted RBP8.46□□□□□ -1.06
VPS11-208ENST00000621676 ZBTB34Q8NCN2 500 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 DDB2Q92466 427 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 NOL4LQ96MY1 436 aaPredicted RBP8.46□□□□□ -1.06
VPS11-208ENST00000621676 SLC25A33Q9BSK2 321 aa8.46□□□□□ -1.06
VPS11-208ENST00000621676 C15orf61A6NNL5 157 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 ATG12O94817 140 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 ADCYAP1P18509 176 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 SPCS3P61009 180 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 LMO4P61968 165 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 EIF4EBP1Q13541 118 aaPredicted RBP8.45□□□□□ -1.06
VPS11-208ENST00000621676 GNB4Q9HAV0 340 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 UPK2O00526 184 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 IGHV3-11P01762 117 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 MMP9P14780 707 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 TMEM11P17152 192 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 EIF5AP63241 154 aaKnown RBP8.45□□□□□ -1.06
VPS11-208ENST00000621676 FXYD3Q14802 87 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 VMA21Q3ZAQ7 101 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 RCC1LQ96I51 464 aaKnown RBP8.45□□□□□ -1.06
VPS11-208ENST00000621676 WDR61Q9GZS3 305 aaKnown RBP8.45□□□□□ -1.06
VPS11-208ENST00000621676 MAST4O15021 2626 aa8.45□□□□□ -1.06
VPS11-208ENST00000621676 PAGE4O60829 102 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 SPP1P10451 314 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 SULT1A2P50226 295 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 DLX6P56179 175 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 B2MP61769 119 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 ERHP84090 104 aaKnown RBP8.44□□□□□ -1.06
VPS11-208ENST00000621676 ZNF726P1Q15940 193 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 PPP1R27Q86WC6 154 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 CYB561D1Q8N8Q1 229 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 RAB24Q969Q5 203 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 TMEM186Q96B77 213 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 SMR3AQ99954 134 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 FNDC4Q9H6D8 234 aaPredicted RBP8.44□□□□□ -1.06
VPS11-208ENST00000621676 BAHCC1Q9P281 2608 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 IGKV1OR2-108A0A075B7D4 117 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 MAP1LC3B2A6NCE7 125 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 TAAR5O14804 337 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 TNFRSF13BO14836 293 aaPredicted RBP8.44□□□□□ -1.06
VPS11-208ENST00000621676 OR2J3O76001 311 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 IGHV2-5P01817 119 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 PDLIM4P50479 330 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 TAS2R30P59541 319 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 MORN5Q5VZ52 161 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 TREML4Q6UXN2 200 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 Q6ZS46 218 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 WFDC11Q8NEX6 87 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 OR1B1Q8NGR6 318 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 NPCDR1Q9BY65 106 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 MAP1LC3BQ9GZQ8 125 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 BARX1Q9HBU1 254 aaPredicted RBP8.44□□□□□ -1.06
VPS11-208ENST00000621676 HIVEP1P15822 2718 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 TMEM8BA6NDV4 472 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 TRIM77I1YAP6 450 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 IL3RAP26951 378 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 RPL27AP46776 148 aaKnown RBP8.44□□□□□ -1.06
VPS11-208ENST00000621676 DTX2Q86UW9 622 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 PUSL1Q8N0Z8 303 aaKnown RBP8.44□□□□□ -1.06
VPS11-208ENST00000621676 OR4F5Q8NH21 305 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 SMIM8Q96KF7 97 aa8.44□□□□□ -1.06
VPS11-208ENST00000621676 OR4F4Q96R69 305 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms