RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 LYG2Q86SG7 212 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 FAM223AQ8IWN6 122 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 OR2C3Q8N628 320 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 NECAP1Q8NC96 275 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 OR52B4Q8NGK2 314 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 RNASE11Q8TAA1 199 aaKnown RBP11.04□□□□□ -0.64
CBWD3-217ENST00000621474 USMG5Q96IX5 58 aa11.04□□□□□ -0.64
CBWD3-217ENST00000621474 F11RQ9Y624 299 aaKnown RBP11.04□□□□□ -0.64
CBWD3-217ENST00000621474 DNAH3Q8TD57 4116 aa11.03□□□□□ -0.64
CBWD3-217ENST00000621474 FBN3Q75N90 2809 aa11.03□□□□□ -0.64
CBWD3-217ENST00000621474 A0A0G2JLM5 398 aa11.03□□□□□ -0.64
CBWD3-217ENST00000621474 FAM240BA0A1B0GVZ2 78 aa11.03□□□□□ -0.64
CBWD3-217ENST00000621474 DUXBA0A1W2PPF3 345 aa11.03□□□□□ -0.64
CBWD3-217ENST00000621474 INS-IGF2F8WCM5 200 aa11.03□□□□□ -0.64
CBWD3-217ENST00000621474 NDUFB8O95169 186 aa11.03□□□□□ -0.64
CBWD3-217ENST00000621474 TRBV12-3P01733 135 aa11.03□□□□□ -0.64
CBWD3-217ENST00000621474 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.03□□□□□ -0.64
CBWD3-217ENST00000621474 C13orf42A0A1B0GVH6 325 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 DUS4LO95620 317 aaKnown RBP11.02□□□□□ -0.64
CBWD3-217ENST00000621474 ZNF616Q08AN1 781 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 C4orf46Q504U0 113 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 C11orf87Q6NUJ2 197 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 MZT2BQ6NZ67 158 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 NRARPQ7Z6K4 114 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 ZNF114Q8NC26 417 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 OR1N2Q8NGR9 330 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 OR52E5Q8NH55 327 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 FBXL7Q9UJT9 491 aa11.02□□□□□ -0.64
CBWD3-217ENST00000621474 MFSD2BA6NFX1 497 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 MPTX1A8MV57 137 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 PITX3O75364 302 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 NXPH3O95157 252 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 DHFRP00374 187 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 IFNA17P01571 189 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 SULT1A3P0DMM9 295 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 SULT1A4P0DMN0 295 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 DEFA4P12838 97 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 DUSP18Q8NEJ0 188 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 CCDC140Q96MF4 163 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 PLEKHA3Q9HB20 300 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 S4R3C0 116 aa11.02□□□□□ -0.65
CBWD3-217ENST00000621474 LINC01619G3V211 115 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 ADAP1O75689 374 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 HSPB1P04792 205 aaKnown RBP11.01□□□□□ -0.65
CBWD3-217ENST00000621474 SLURP1P55000 103 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 RAB25P57735 213 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 SPCS3P61009 180 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 ATP5G2Q06055 141 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 EXOSC2Q13868 293 aaKnown RBP11.01□□□□□ -0.65
CBWD3-217ENST00000621474 SMCO1Q147U7 214 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 OR1P1Q8NH06 330 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 MITD1Q8WV92 249 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 HSPB7Q9UBY9 170 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 TMED3Q9Y3Q3 217 aa11.01□□□□□ -0.65
CBWD3-217ENST00000621474 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11□□□□□ -0.65
CBWD3-217ENST00000621474 A0A1B0GU03 582 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 ANKRD34BA5PLL1 514 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 IGHV3-23P01764 117 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 HOXB5P09067 269 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 H2AFB2P0C5Z0 115 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 HIST1H1BP16401 226 aaKnown RBP11□□□□□ -0.65
CBWD3-217ENST00000621474 BSXQ3C1V8 233 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 GGNBP1Q5YKI7 109 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 PVRIGQ6DKI7 326 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 SEC22CQ9BRL7 303 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 PDCD10Q9BUL8 212 aa11□□□□□ -0.65
CBWD3-217ENST00000621474 PEF1Q9UBV8 284 aaKnown RBP11□□□□□ -0.65
CBWD3-217ENST00000621474 F8W735 103 aaPredicted RBP10.99□□□□□ -0.65
CBWD3-217ENST00000621474 G3V4G9 280 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 K7EIM0 57 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 OR8U8P0C7N1 319 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 RNASE2P10153 161 aaKnown RBP10.99□□□□□ -0.65
CBWD3-217ENST00000621474 SLC25A6P12236 298 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 IGLL1P15814 213 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 CD33P20138 364 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 HOXD3P31249 432 aaPredicted RBP10.99□□□□□ -0.65
CBWD3-217ENST00000621474 TNFRSF9Q07011 255 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 OXLD1Q5BKU9 147 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 ENKURQ8TC29 256 aa10.99□□□□□ -0.65
CBWD3-217ENST00000621474 DLX4Q92988 240 aaPredicted RBP10.99□□□□□ -0.65
CBWD3-217ENST00000621474 RANGRFQ9HD47 186 aaPredicted RBP10.99□□□□□ -0.65
CBWD3-217ENST00000621474 PIGBOS1A0A0B4J2F0 54 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 BMPR1BO00238 502 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 HOXA1P49639 335 aaPredicted RBP10.98□□□□□ -0.65
CBWD3-217ENST00000621474 SLC25A24Q6NUK1 477 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 COQ8AQ8NI60 647 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 TMEM170AQ8WVE7 144 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 IGHV3-21A0A0B4J1V1 117 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 PPP5D1E7EU14 171 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 I3L2K1 104 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 ERHP84090 104 aaKnown RBP10.98□□□□□ -0.65
CBWD3-217ENST00000621474 ZNF502Q8TBZ5 544 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 SCARB1Q8WTV0 552 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 DCUN1D4Q92564 292 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 DPF1Q92782 380 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 THYN1Q9P016 225 aa10.98□□□□□ -0.65
CBWD3-217ENST00000621474 SPNP16150 400 aa10.97□□□□□ -0.65
CBWD3-217ENST00000621474 DEFA1P59665 94 aa10.97□□□□□ -0.65
CBWD3-217ENST00000621474 DEFA3P59666 94 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms