RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 OR8U8P0C7N1 319 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 BAXQ07812 192 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 BAP18Q8IXM2 172 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 OR10P1Q8NGE3 313 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 ABHD5Q8WTS1 349 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 SLC25A33Q9BSK2 321 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 TEX22C9J3V5 150 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 PRH1P02810 166 aa12.62□□□□□ -0.39
CBWD3-216ENST00000621396 IGHV3-21A0A0B4J1V1 117 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 TPT1P13693 172 aaKnown RBP12.61□□□□□ -0.39
CBWD3-216ENST00000621396 LRRC75BQ2VPJ9 315 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 SPNS3Q6ZMD2 512 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 PINX1Q96BK5 328 aaKnown RBP12.61□□□□□ -0.39
CBWD3-216ENST00000621396 ZNF48Q96MX3 618 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-216ENST00000621396 LINC00527Q9UJ94 153 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 TAAR5O14804 337 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 JTBO76095 146 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 Q71RC1 249 aaPredicted RBP12.61□□□□□ -0.39
CBWD3-216ENST00000621396 P2RX4Q99571 388 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 ATP5SQ99766 215 aa12.61□□□□□ -0.39
CBWD3-216ENST00000621396 IGHV7-81A0A0B4J1V7 117 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 SMCO3A2RU48 225 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 TEX46H3BTG2 121 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 RGS13O14921 159 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 AMY1AP04745 511 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 RNASE2P10153 161 aaKnown RBP12.6□□□□□ -0.39
CBWD3-216ENST00000621396 UBA52P62987 128 aaKnown RBP12.6□□□□□ -0.39
CBWD3-216ENST00000621396 HBG1P69891 147 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 HBG2P69892 147 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 ERHP84090 104 aaKnown RBP12.6□□□□□ -0.39
CBWD3-216ENST00000621396 RASL11BQ9BPW5 248 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 RSG1Q9BU20 258 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 SLC25A32Q9H2D1 315 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 YAE1D1Q9NRH1 226 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 PLA2G2EQ9NZK7 142 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 FSHBP01225 129 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 HTR2BP41595 481 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 MFAP2P55001 183 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 SLC25A24Q6NUK1 477 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 Q6ZS46 218 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 LFNGQ8NES3 379 aa12.6□□□□□ -0.39
CBWD3-216ENST00000621396 IFNA7P01567 189 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 BLCAPP62952 87 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 DEFA5Q01523 94 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 C9orf152Q5JTZ5 239 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 UBAC2Q8NBM4 344 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 STOML3Q8TAV4 291 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 RBM14Q96PK6 669 aaKnown RBP12.59□□□□□ -0.39
CBWD3-216ENST00000621396 UBQLN2Q9UHD9 624 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 PRSS46E5RG02 174 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 ZNF562Q6V9R5 426 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 C5orf56Q8N8D9 126 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 C1RLQ9NZP8 487 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 DMRT1Q9Y5R6 373 aa12.59□□□□□ -0.39
CBWD3-216ENST00000621396 BORCS7-ASMTA0A0B4J1R7 106 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 A0A1W2PN81 502 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 ATP6V0CP27449 155 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 CHRNA7P36544 502 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 FHITP49789 147 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 RPP30P78346 268 aaKnown RBP12.58□□□□□ -0.4
CBWD3-216ENST00000621396 ARSJQ5FYB0 599 aaPredicted RBP12.58□□□□□ -0.4
CBWD3-216ENST00000621396 ARPC1AQ92747 370 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 TAF15Q92804 592 aaKnown RBP eCLIP12.58□□□□□ -0.4
CBWD3-216ENST00000621396 PARP11Q9NR21 331 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 RAB11AP62491 216 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 ZNF266Q14584 549 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 ASPHD1Q5U4P2 390 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 SLC7A5P1Q8MH63 180 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 OR5T1Q8NG75 326 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 CACFD1Q9UGQ2 172 aa12.58□□□□□ -0.4
CBWD3-216ENST00000621396 HIVEP2P31629 2446 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 G3V318 75 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 EGR2P11161 476 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-216ENST00000621396 MAS1LP35410 378 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 BSXQ3C1V8 233 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 MISP3Q96FF7 219 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 FNDC4Q9H6D8 234 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-216ENST00000621396 S4R3C0 116 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 ATP6V0E1O15342 81 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 HOXA3O43365 443 aaPredicted RBP12.57□□□□□ -0.4
CBWD3-216ENST00000621396 EIF3GO75821 320 aaKnown RBP eCLIP12.57□□□□□ -0.4
CBWD3-216ENST00000621396 IER3P46695 156 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 ZNF767PQ75MW2 155 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 OR2T6Q8NHC8 308 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 UQCC1Q9NVA1 299 aa12.57□□□□□ -0.4
CBWD3-216ENST00000621396 A6NDX4 124 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 DEFA4P12838 97 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 OPRK1P41145 380 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 C2orf83Q53S99 150 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 SCARB1Q8WTV0 552 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 WNT10AQ9GZT5 417 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 MRPL36Q9P0J6 103 aaKnown RBP12.56□□□□□ -0.4
CBWD3-216ENST00000621396 MOB4Q9Y3A3 225 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 CD5LO43866 347 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 DFFBO76075 338 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 IFNA5P01569 189 aa12.56□□□□□ -0.4
CBWD3-216ENST00000621396 TMEM182Q6ZP80 229 aaPredicted RBP12.56□□□□□ -0.4
CBWD3-216ENST00000621396 STPG2Q8N412 459 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms