RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 CDC42EP3Q9UKI2 254 aa16.04■□□□□ 0.16
PDLIM3-212ENST00000620787 HEATR1Q9H583 2144 aaKnown RBP16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 MMDQ15546 238 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 CT45A1Q5HYN5 189 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 MRPL54Q6P161 138 aaKnown RBP16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 CT45A3Q8NHU0 189 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 PPP1R35Q8TAP8 253 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 STARD4Q96DR4 205 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 FER1L6-AS2Q96M78 137 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 TRIB1Q96RU8 372 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 HINT2Q9BX68 163 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 TANC2Q9HCD6 1990 aa16.03■□□□□ 0.16
PDLIM3-212ENST00000620787 ITGB1BP1O14713 200 aa16.02■□□□□ 0.16
PDLIM3-212ENST00000620787 HLA-DQA1P01909 254 aa16.02■□□□□ 0.16
PDLIM3-212ENST00000620787 C3orf79P0CE67 100 aa16.02■□□□□ 0.16
PDLIM3-212ENST00000620787 CGB3P0DN86 165 aa16.02■□□□□ 0.16
PDLIM3-212ENST00000620787 CGB7P0DN87 165 aa16.02■□□□□ 0.16
PDLIM3-212ENST00000620787 TMEM164Q5U3C3 297 aa16.02■□□□□ 0.16
PDLIM3-212ENST00000620787 ZFP30Q9Y2G7 519 aa16.02■□□□□ 0.16
PDLIM3-212ENST00000620787 OR51B2Q9Y5P1 312 aa16.02■□□□□ 0.16
PDLIM3-212ENST00000620787 IGHV2OR16-5A0A0B4J2B6 119 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 OR7C2O60412 319 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 REG1AP05451 166 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 IGLC2P0DOY2 106 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 IGLC3P0DOY3 106 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 GATA2P23769 480 aaPredicted RBP16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 C17orf58Q2M2W7 97 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 IBA57Q5T440 356 aaKnown RBP16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 ATP1A1-AS1Q5TC04 95 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 VWA1Q6PCB0 445 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 GCSAMQ8N6F7 178 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 PRO3102Q9H379 93 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 UQCR10Q9UDW1 63 aa16.02■□□□□ 0.15
PDLIM3-212ENST00000620787 HYPMO75409 117 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 CHRNB4P30926 498 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 PPOXP50336 477 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 SLC35E1Q96K37 410 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 MUC3AQ02505 3323 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 IGLV1-44P01699 117 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 KIR2DL2P43627 348 aaPredicted RBP16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 PRRX1P54821 245 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 MZT1Q08AG7 82 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 POU2AF1Q16633 256 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 C1orf162Q8NEQ5 155 aaPredicted RBP16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 TSKUQ8WUA8 353 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 PPIAL4AQ9Y536 164 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 DSCAMO60469 2012 aa16.01■□□□□ 0.15
PDLIM3-212ENST00000620787 SPRNQ5BIV9 151 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 DMRTA1Q5VZB9 504 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 C11orf42Q8N5U0 333 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 WDFY4Q6ZS81 3184 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 IGHV1-18A0A0C4DH31 117 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 MGST1P10620 155 aaKnown RBP16■□□□□ 0.15
PDLIM3-212ENST00000620787 MSMPQ1L6U9 139 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 FAM19A2Q8N3H0 131 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 STPG4Q8N801 248 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 TMEM178AQ8NBL3 297 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 PLEKHA3Q9HB20 300 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 GCM1Q9NP62 436 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 TNCP24821 2201 aa16■□□□□ 0.15
PDLIM3-212ENST00000620787 IZUMO1RA6ND01 250 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 J3QR06 171 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 PRCDQ00LT1 54 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 PNKDQ8N490 385 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 TMEM265A0A087WTH1 108 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 A0A1W2PRE2 83 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 DPRXA6NFQ7 191 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 APCSP02743 223 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 ZNF883P0CG24 379 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 CFHR2P36980 270 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 SERTAD4Q9NUC0 356 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 PRNDQ9UKY0 176 aa15.99■□□□□ 0.15
PDLIM3-212ENST00000620787 SIAH2O43255 324 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 NDUFB8O95169 186 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 CA1P00915 261 aaPredicted RBP15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 TAS2R45P59539 299 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 SLAQ13239 276 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 ZNF439Q8NDP4 499 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 WNT10AQ9GZT5 417 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 PRRC2CQ9Y520 2896 aaKnown RBP15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 Q6ZN92 141 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 C19orf35Q6ZS72 473 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 C9orf106Q8NAJ2 232 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 FAM168AQ92567 244 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 TXN2Q99757 166 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 C19orf24Q9BVV8 132 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 DNAJC4Q9NNZ3 241 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 ZNF257Q9Y2Q1 563 aa15.98■□□□□ 0.15
PDLIM3-212ENST00000620787 TECTAO75443 2155 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 USF1P22415 310 aaPredicted RBP15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 RTL8BQ17RB0 113 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 LYG1Q8N1E2 194 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 OR9G1Q8NH87 305 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 C18orf32Q8TCD1 76 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 ADTRPQ96IZ2 230 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 SLC25A33Q9BSK2 321 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 SLC35D1Q9NTN3 355 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 LAMTOR2Q9Y2Q5 125 aa15.97■□□□□ 0.15
PDLIM3-212ENST00000620787 PCNX2A6NKB5 2137 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms