RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 CGAP01215 116 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 IGFBP2P18065 325 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 COMPP49747 757 aaPredicted RBP7.01□□□□□ -1.29
ALMS1-208ENST00000620466 HINT1P49773 126 aaPredicted RBP7.01□□□□□ -1.29
ALMS1-208ENST00000620466 TNFSF10P50591 281 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H1AQ02539 215 aaPredicted RBP7.01□□□□□ -1.29
ALMS1-208ENST00000620466 C2orf83Q53S99 150 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 OR9G1Q8NH87 305 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 ITLN2Q8WWU7 325 aaPredicted RBP7.01□□□□□ -1.29
ALMS1-208ENST00000620466 IL36BQ9NZH7 164 aa7.01□□□□□ -1.29
ALMS1-208ENST00000620466 E9PLN8 166 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 H3BTX0 84 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 CXCL1P09341 107 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 CECR9P0C854 216 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 C5orf24Q7Z6I8 188 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 FDCSPQ8NFU4 85 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 TMEM186Q96B77 213 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 IMMP2LQ96T52 175 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 MRPS16Q9Y3D3 137 aaKnown RBP7□□□□□ -1.29
ALMS1-208ENST00000620466 CIRBPQ14011 172 aaKnown RBP7□□□□□ -1.29
ALMS1-208ENST00000620466 SRSF7Q16629 238 aaKnown RBP eCLIP7□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H4GQ99525 98 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 MRPL32Q9BYC8 188 aaKnown RBP7□□□□□ -1.29
ALMS1-208ENST00000620466 CLDN16Q9Y5I7 305 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 COX6CP09669 75 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 OR4C13Q8NGP0 309 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 ZNF524Q96C55 264 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 A0A1B0GW64 132 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 FOXI3A8MTJ6 420 aaPredicted RBP7□□□□□ -1.29
ALMS1-208ENST00000620466 OR4A47Q6IF82 309 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 SRSF12Q8WXF0 261 aaKnown RBP7□□□□□ -1.29
ALMS1-208ENST00000620466 FAM168AQ92567 244 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 KLK15Q9H2R5 256 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 GP6Q9HCN6 339 aa7□□□□□ -1.29
ALMS1-208ENST00000620466 LOC107984156A0A0G2JMH3 177 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 C7orf71A4D174 169 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BKO60814 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BJP06899 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BOP23527 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BBP33778 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BDP58876 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 SELENOTP62341 195 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BCP62807 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST2H2BEQ16778 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.99□□□□□ -1.29
ALMS1-208ENST00000620466 FAM159AQ6UWV7 190 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 ARL17AQ8IVW1 177 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BHQ93079 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 DUX3Q96PT4 197 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BNQ99877 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 HIST1H2BMQ99879 126 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 RBFOX2O43251 390 aaKnown RBP eCLIP6.99□□□□□ -1.29
ALMS1-208ENST00000620466 VDAC2P45880 294 aaPredicted RBP6.99□□□□□ -1.29
ALMS1-208ENST00000620466 FAM201AQ5SY85 155 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 C19orf24Q9BVV8 132 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 C1QTNF9BB2RNN3 333 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 MOSP00540 346 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 IGHV3-48P01763 117 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 IGHV2OR16-5A0A0B4J2B6 119 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 IGKV1D-33P01593 117 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 IGKV1-33P01594 117 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 BSPH1Q075Z2 132 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
ALMS1-208ENST00000620466 F11RQ9Y624 299 aaKnown RBP6.99□□□□□ -1.29
ALMS1-208ENST00000620466 CSRP2Q16527 193 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 MST1LQ2TV78 715 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 LINC00305Q7Z4B0 112 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 DMRTA2Q96SC8 542 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 UQCR10Q9UDW1 63 aa6.99□□□□□ -1.29
ALMS1-208ENST00000620466 RNASE4P34096 147 aaKnown RBP6.98□□□□□ -1.29
ALMS1-208ENST00000620466 ZFP36L1Q07352 338 aaKnown RBP6.98□□□□□ -1.29
ALMS1-208ENST00000620466 MIR17HGQ75NE6 70 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 OR13C6PQ8NH95 151 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 TMEM170AQ8WVE7 144 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 S4R3C0 116 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 LNP1A1A4G5 178 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 FOXG1P55316 489 aaPredicted RBP6.98□□□□□ -1.29
ALMS1-208ENST00000620466 ATOH7Q8N100 152 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 PMCHL1Q16048 86 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 TCF23Q7RTU1 214 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 GTF3AQ92664 365 aaKnown RBP6.98□□□□□ -1.29
ALMS1-208ENST00000620466 ADMP35318 185 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 HGFACQ04756 655 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 TMEM30BQ3MIR4 351 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 OR4X2Q8NGF9 303 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 NPIPB3Q92617 1050 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 C9JCJ5 164 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 SOD3P08294 240 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 NEU4Q8WWR8 484 aaPredicted RBP6.98□□□□□ -1.29
ALMS1-208ENST00000620466 MBD3L1Q8WWY6 194 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 TMEM106BQ9NUM4 274 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 SPTBP11277 2137 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 EMP1P54849 157 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 Q0VFX4 171 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 IFI27L2Q9H2X8 130 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 SPRR3Q9UBC9 169 aa6.98□□□□□ -1.29
ALMS1-208ENST00000620466 TICRRQ7Z2Z1 1910 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 PSMB11A5LHX3 300 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 IL4P05112 153 aa6.97□□□□□ -1.29
ALMS1-208ENST00000620466 OR9G9P0C7N8 305 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms