RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	TRAV41	A0A0B4J266	112 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	C15orf61	A6NNL5	157 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	ADARB2-AS1	A8MUL3	147 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	TCF21	O43680	179 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	SAP30	O75446	220 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	CD8A	P01732	235 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	TRGC2	P03986	189 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	SAA1	P0DJI8	122 aa	Predicted RBP	6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	MESP2	Q0VG99	397 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	ORMDL3	Q8N138	153 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	FOXC2	Q99958	501 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	REPIN1	Q9BWE0	567 aa	Known RBP	6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	IGLV3-12	A0A075B6K2	115 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	APOH	P02749	345 aa	Predicted RBP	6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	LINC01590	Q5TEZ4	76 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	SIGLEC15	Q6ZMC9	328 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	TMEM86B	Q8N661	226 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	SDHC	Q99643	169 aa	Predicted RBP	6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	SAA2-SAA4	A0A096LPE2	208 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	IGHV3-11	P01762	117 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	SAA2	P0DJI9	122 aa	Predicted RBP	6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	EGR1	P18146	543 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	EGR4	Q05215	589 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	BIVM	Q86UB2	503 aa		6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	PEF1	Q9UBV8	284 aa	Known RBP	6.18	□□□□□ -1.42
PCDH15-231	ENST00000617271	TUBGCP6	Q96RT7	1819 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271		B4DSR2	109 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	PAX8	Q06710	450 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	ORMDL2	Q53FV1	153 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	ST6GALNAC3	Q8NDV1	305 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	C1QTNF4	Q9BXJ3	329 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	TYMS	P04818	313 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	PSG7	Q13046	419 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	LINC01559	Q495D7	138 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	OR2K2	Q8NGT1	345 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	SLC25A2	Q9BXI2	301 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	TRIP11	Q15643	1979 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	ZNFX1	Q9P2E3	1918 aa	Known RBP	6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	MSGN1	A6NI15	193 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	UMOD	P07911	640 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	UCP1	P25874	307 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	RHOG	P84095	191 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	RNF125	Q96EQ8	232 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	IGHV3OR16-13	A0A075B7E8	117 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	IGHV3-74	A0A0B4J1X5	117 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271		A0A0G2JK05	382 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	C17orf98	A8MV24	154 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271		M0R1W7	72 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	RNF182	Q8N6D2	247 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271		H0YL77	283 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	PSCA	O43653	123 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	GCM2	O75603	506 aa	Predicted RBP	6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	ZXDC	Q2QGD7	858 aa	Predicted RBP	6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	FAM71F2	Q6NXP2	309 aa		6.17	□□□□□ -1.42
PCDH15-231	ENST00000617271	TTC3	P53804	2025 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	IGHV3-49	A0A0A0MS15	119 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	ZNF660	Q6AZW8	331 aa	Predicted RBP	6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	UNQ6494/PRO21346	Q6UXR6	183 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	VMO1	Q7Z5L0	202 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	TMEM144	Q7Z5S9	345 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	LINC01356	Q8N9X3	169 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	TBL2	Q9Y4P3	447 aa	Known RBP	6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	NUMA1	Q14980	2115 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	TRAV40	A0A0B4J280	105 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	IGHV1-18	A0A0C4DH31	117 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271		A0A0G2JMM0	328 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271		A0A1W2PPB8	328 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271		A0A1W2PRS3	328 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	FAM223B	A6NKX1	122 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	KIR3DP1	A8MWS1	328 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	TMEM50A	O95807	157 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	CGA	P01215	116 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	PPBP	P02775	128 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	PRCD	Q00LT1	54 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	ZNF415	Q09FC8	603 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	SPSB3	Q6PJ21	355 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	FAM223A	Q8IWN6	122 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	GTF3A	Q92664	365 aa	Known RBP	6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	ZNF646	O15015	1829 aa	Predicted RBP	6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	IGHV3-35	A0A0C4DH35	117 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271		F2Z2F3	143 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	KLF4	O43474	513 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	TFF3	Q07654	80 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	CYSLTR1	Q9Y271	337 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271		F8WEM9	126 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	NDUFS8	O00217	210 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	CD28	P10747	220 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	SRSF7	Q16629	238 aa	Known RBP eCLIP	6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	ZNF497	Q6ZNH5	498 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	BMPER	Q8N8U9	685 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	TRBV7-1	A0A0A6YYK4	115 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	PIN1P1	O15428	100 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	ZFP36L1	Q07352	338 aa	Known RBP	6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	MORN3	Q6PF18	240 aa	Predicted RBP	6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	ASCL4	Q6XD76	172 aa		6.16	□□□□□ -1.42
PCDH15-231	ENST00000617271	TRBV6-7	A0A0A0MS04	114 aa		6.15	□□□□□ -1.42
PCDH15-231	ENST00000617271	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.15	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms