RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 FSTL3O95633 263 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 SFTA3P0C7M3 94 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 HTR1DP28221 377 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 ZNF137PP52743 207 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 TNXAQ16473 311 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 GUK1Q16774 197 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 AARDQ4LEZ3 155 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 TREML4Q6UXN2 200 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 PDPNQ86YL7 162 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 IQCF2Q8IXL9 164 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 OR52E5Q8NH55 327 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 OR2T6Q8NHC8 308 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 LYPD6BQ8NI32 183 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 FAM103A1Q9BTL3 118 aaKnown RBP6.26□□□□□ -1.41
NEK3-207ENST00000617054 TMEM147Q9BVK8 224 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 BET1LQ9NYM9 111 aa6.26□□□□□ -1.41
NEK3-207ENST00000617054 SOX21Q9Y651 276 aaPredicted RBP6.26□□□□□ -1.41
NEK3-207ENST00000617054 GCN1Q92616 2671 aaKnown RBP6.25□□□□□ -1.41
NEK3-207ENST00000617054 A0A1W2PPI3 338 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 ZFP92A6NM28 416 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 FAM90A9PA6NNJ1 464 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 KRBOX1C9JBD0 128 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 LY6LH3BQJ8 138 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 IL3RAP26951 378 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 AKR1C3P42330 323 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 PRCDQ00LT1 54 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 PLGLAQ15195 96 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 POU2AF1Q16633 256 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 FFAR4Q5NUL3 377 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 MIC13Q5XKP0 118 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 DHRS7BQ6IAN0 325 aaPredicted RBP6.25□□□□□ -1.41
NEK3-207ENST00000617054 BEND2Q8NDZ0 799 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 C20orf24Q9BUV8 137 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 SCRT1Q9BWW7 348 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 NDUFA4L2Q9NRX3 87 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 METTL1Q9UBP6 276 aaKnown RBP6.25□□□□□ -1.41
NEK3-207ENST00000617054 PRSS46E5RG02 174 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 TOX4O94842 621 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 AREGP15514 252 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 PRTN3P24158 256 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 SSBP2P81877 361 aaPredicted RBP6.25□□□□□ -1.41
NEK3-207ENST00000617054 IL34Q6ZMJ4 242 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 C8orf31Q8N9H6 132 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 GATAD1Q8WUU5 269 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 FAM168AQ92567 244 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 RCC1LQ96I51 464 aaKnown RBP6.25□□□□□ -1.41
NEK3-207ENST00000617054 GNG13Q9P2W3 67 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 DPM3Q9P2X0 92 aa6.25□□□□□ -1.41
NEK3-207ENST00000617054 HOXB4P17483 251 aaPredicted RBP6.24□□□□□ -1.41
NEK3-207ENST00000617054 MC5RP33032 325 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 PSG5Q15238 335 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 MMDQ15546 238 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 TPTE2P1Q5T6R2 138 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 FAM122CQ6P4D5 195 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 TMEM88Q6PEY1 159 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 MGST2Q99735 147 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 IGKV1OR2-108A0A075B7D4 117 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 UMAD1C9J7I0 102 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 TRIM77I1YAP6 450 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 CD5P06127 495 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 RAB5CP51148 216 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 RAB11AP62491 216 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 PAX2Q02962 417 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 TLE4Q04727 773 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 ZNF709Q8N972 641 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 OR10G4Q8NGN3 311 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 OR10G9Q8NGN4 311 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 OR10G7Q8NGN6 311 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 RXFP4Q8TDU9 374 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 ZMAT4Q9H898 229 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 ACTL6BO94805 426 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 USF1P22415 310 aaPredicted RBP6.24□□□□□ -1.41
NEK3-207ENST00000617054 DVL1P1P54792 670 aaPredicted RBP6.24□□□□□ -1.41
NEK3-207ENST00000617054 VMA21Q3ZAQ7 101 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 PDLIM3Q53GG5 364 aaPredicted RBP6.24□□□□□ -1.41
NEK3-207ENST00000617054 FAM120AOSQ5T036 256 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 BRD3OSQ6XYD6 125 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 OR11H6Q8NGC7 330 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 OR1L8Q8NGR8 309 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 TMEM167AQ8TBQ9 72 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 ACY3Q96HD9 319 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 TBX15Q96SF7 602 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 SIGLEC9Q9Y336 463 aa6.24□□□□□ -1.41
NEK3-207ENST00000617054 SH2D7A6NKC9 451 aaPredicted RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 NCBP2LA6PVI3 153 aaKnown RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 VENTXO95231 258 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 SNRNP70P08621 437 aaKnown RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 SNRPCP09234 159 aaKnown RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 RNASE2P10153 161 aaKnown RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 PDLIM4P50479 330 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 RPP30P78346 268 aaKnown RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 PPP1R27Q86WC6 154 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 SLC39A9Q9NUM3 307 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 MRPL36Q9P0J6 103 aaKnown RBP6.23□□□□□ -1.41
NEK3-207ENST00000617054 ZNF257Q9Y2Q1 563 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 IGHV2-70DA0A0C4DH43 119 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 M0R1W7 72 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 NPBWR1P48145 328 aa6.23□□□□□ -1.41
NEK3-207ENST00000617054 ATP6V1FQ16864 119 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms