RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 S1PR2O95136 353 aa13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 GAPDHP04406 335 aaKnown RBP13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 ID3Q02535 119 aa13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 DIAPH2-AS1Q14236 149 aa13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 TPTE2P1Q5T6R2 138 aa13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 EIF5AL1Q6IS14 154 aaKnown RBP13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 OR4A16Q8NH70 328 aa13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 OSR1Q8TAX0 266 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 RCL1Q9Y2P8 373 aaKnown RBP13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 MOB4Q9Y3A3 225 aa13.7□□□□□ -0.22
TRAPPC3-209ENST00000616395 BORCS7-ASMTA0A0B4J1R7 106 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 H7C2Y5 167 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 G6PCP35575 357 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 ZNF137PP52743 207 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 RPP30P78346 268 aaKnown RBP13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 SLC35B1P78383 322 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 LCNL1Q6ZST4 164 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 PDPNQ86YL7 162 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 COMMD1Q8N668 190 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 OR5AC2Q9NZP5 309 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 UBQLN2Q9UHD9 624 aa13.69□□□□□ -0.22
TRAPPC3-209ENST00000616395 LEUTXA8MZ59 168 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 LY6LH3BQJ8 138 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 SSSCA1O60232 199 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 CRYZL1O95825 349 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 CAV2P51636 162 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 TAS2R30P59541 319 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 STX12Q86Y82 276 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 ODF3L1Q8IXM7 274 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 VSTM2AQ8TAG5 236 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 DDB2Q92466 427 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 C5orf30Q96GV9 206 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 ZNF471Q9BX82 626 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 FKBP11Q9NYL4 201 aa13.68□□□□□ -0.22
TRAPPC3-209ENST00000616395 RBMY1BA6NDE4 496 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 RBMY1EA6NEQ0 496 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 SYNGR2O43760 224 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 PITX3O75364 302 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 IGKV1-39P01597 117 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 IGKV1D-39P04432 117 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 RPLP1P05386 114 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 RBMY1DP0C7P1 496 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 TPT1P13693 172 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 BAXQ07812 192 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 TEX261Q6UWH6 196 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 OR2C3Q8N628 320 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 RPEQ96AT9 228 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 FLYWCH2Q96CP2 140 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 ZNF251Q9BRH9 671 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 WASHC3Q9Y3C0 194 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 U3KQ87 197 aa13.67□□□□□ -0.22
TRAPPC3-209ENST00000616395 RNF222A6NCQ9 220 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 H0YIZ8 118 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 SHOXO15266 292 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 REG1BP48304 166 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 POLR2GP62487 172 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 CXorf66Q5JRM2 361 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 RBMXL1Q96E39 390 aaKnown RBP13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 PHYHIPLQ96FC7 376 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 TM2D3Q9BRN9 247 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 ENY2Q9NPA8 101 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 PRNDQ9UKY0 176 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 WSB1Q9Y6I7 421 aa13.66□□□□□ -0.22
TRAPPC3-209ENST00000616395 OOSP1A8MZH6 123 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 PROP1O75360 226 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 IFNA17P01571 189 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 FAM106CPP0CH98 169 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 CT45A6P0DMU7 189 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 CT45A5P0DMU8 189 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 CT45A7P0DMV0 189 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 CCDC144NLQ6NUI1 221 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 STPG2Q8N412 459 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 C5orf56Q8N8D9 126 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 ZNF383Q8NA42 475 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 OR5AN1Q8NGI8 311 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 RHOVQ96L33 236 aa13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 LYRM2Q9NU23 88 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC3-209ENST00000616395 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 CEBPZOSA8MTT3 80 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 CDX1P47902 265 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 LGALS7P47929 136 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 HBG1P69891 147 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 HBG2P69892 147 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 IFITM2Q01629 132 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 TNFRSF9Q07011 255 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 ZNF266Q14584 549 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 POU2AF1Q16633 256 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 VMA21Q3ZAQ7 101 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 TEX38Q6PEX7 206 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 SLC35E3Q7Z769 313 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 ZNF680Q8NEM1 530 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 OR4A5Q8NH83 315 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 SMIM8Q96KF7 97 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 NABP2Q9BQ15 211 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 MRPL20Q9BYC9 149 aaKnown RBP13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 MAGT1Q9H0U3 335 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 HIPK2Q9H2X6 1198 aa13.64□□□□□ -0.23
TRAPPC3-209ENST00000616395 PSENENQ9NZ42 101 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms