RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 C1orf174Q8IYL3 243 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 ZNF295-AS1Q8N0V1 137 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 ZNF525Q8N782 197 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 OR10V1Q8NGI7 309 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 ZNF430Q9H8G1 570 aaPredicted RBP8.22□□□□□ -1.09
GGA3-221ENST00000614198 HSPB7Q9UBY9 170 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 IL19Q9UHD0 177 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 IGKV1-6A0A0C4DH72 117 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 PGPEP1LA6NFU8 196 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 GCSAMQ8N6F7 178 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 CD177Q8N6Q3 437 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 RAB40CQ96S21 281 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 IL36GQ9NZH8 169 aa8.22□□□□□ -1.09
GGA3-221ENST00000614198 IGKV1D-13A0A0B4J2D9 117 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 HYPMO75409 117 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 SERF1AO75920 110 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 IGLC2P0DOY2 106 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 IGLC3P0DOY3 106 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 IGKV1-13P0DP09 117 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 PSG2P11465 335 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 HNRNPA3P51991 378 aaKnown RBP8.21□□□□□ -1.09
GGA3-221ENST00000614198 TFF3Q07654 80 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 EDDM3AQ14507 147 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 LTC4SQ16873 150 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 Q8N976 141 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 OR4C12Q96R67 309 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 CXXC4Q9H2H0 198 aa8.21□□□□□ -1.09
GGA3-221ENST00000614198 HELZ2Q9BYK8 2649 aaKnown RBP8.21□□□□□ -1.1
GGA3-221ENST00000614198 WNT2P09544 360 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 GABRA2P47869 451 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 SUMO1P63165 101 aaKnown RBP8.21□□□□□ -1.1
GGA3-221ENST00000614198 SPATA45Q537H7 98 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 FBLN7Q53RD9 439 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 Q6ZN92 141 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 RFESDQ8TAC1 157 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 ZNF596Q8TC21 504 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 CORO2AQ92828 525 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 GPR146Q96CH1 333 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 GCM1Q9NP62 436 aa8.21□□□□□ -1.1
GGA3-221ENST00000614198 IGLV3-9A0A075B6K5 115 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 PRB3Q04118 309 aaPredicted RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 TMEM211Q6ICI0 200 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 RPP25LQ8N5L8 163 aaKnown RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 SGMS2Q8NHU3 365 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 SEPSECSQ9HD40 501 aaKnown RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 OR1A1Q9P1Q5 309 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 USP9YO00507 2555 aaPredicted RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 GCN1Q92616 2671 aaKnown RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 SYNGR2O43760 224 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 HAND1O96004 215 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 THBS3P49746 956 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 SPINK9Q5DT21 86 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 NEIL1Q96FI4 390 aaPredicted RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 KMT2BQ9UMN6 2715 aaPredicted RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 IGKV1D-17A0A075B6S4 117 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 KIAA1324LA8MWY0 1029 aaPredicted RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 TUSC2O75896 110 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 CRISP2P16562 243 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 LINC00205P59089 165 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 TNFAIP6P98066 277 aaPredicted RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 SLC38A11Q08AI6 406 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 ARL16Q0P5N6 197 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 ACP7Q6ZNF0 438 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 FAM169BQ8N8A8 192 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 OR5D13Q8NGL4 314 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 CCL17Q92583 94 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 WDR61Q9GZS3 305 aaKnown RBP8.2□□□□□ -1.1
GGA3-221ENST00000614198 CSTL1Q9H114 145 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 FBXL7Q9UJT9 491 aa8.2□□□□□ -1.1
GGA3-221ENST00000614198 IGHV3-43A0A0B4J1X8 118 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 A0A0G2JRQ6 117 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 MDFIC2A0A1B0GVS7 189 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 DIRC3C9JPN6 131 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 IGHV3-43DP0DP04 118 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 RPS20P60866 119 aaKnown RBP8.19□□□□□ -1.1
GGA3-221ENST00000614198 ZNF90Q03938 601 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 OR10G9Q8NGN4 311 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 OR10G7Q8NGN6 311 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 PKIBQ9C010 78 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 BET1LQ9NYM9 111 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 MRPS16Q9Y3D3 137 aaKnown RBP8.19□□□□□ -1.1
GGA3-221ENST00000614198 TRAV30A0A087WSZ9 112 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 DEFB108AA8MXU0 73 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 IGKV1D-33P01593 117 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 IGKV1-33P01594 117 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 SLC25A6P12236 298 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 PMCHP20382 165 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 FFAR4Q5NUL3 377 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 ZNF586Q9NXT0 402 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 C11orf94C9JXX5 98 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 KRASP01116 189 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 NTF3P20783 257 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 CBLN1P23435 193 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 SSTR5P35346 364 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 DLX1P56177 255 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 Q0VG73 95 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 HAPLN4Q86UW8 402 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 SIGLECL1Q8N7X8 197 aa8.19□□□□□ -1.1
GGA3-221ENST00000614198 ITLN2Q8WWU7 325 aaPredicted RBP8.19□□□□□ -1.1
GGA3-221ENST00000614198 RNASE6Q93091 150 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms