RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SLC24A4Q8NFF2 622 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 DUX5Q96PT3 197 aa13.9□□□□□ -0.18
SREK1-216ENST00000612404 IGLC7A0M8Q6 106 aa13.89□□□□□ -0.19
SREK1-216ENST00000612404 TEX22C9J3V5 150 aa13.89□□□□□ -0.19
SREK1-216ENST00000612404 AREGP15514 252 aa13.89□□□□□ -0.19
SREK1-216ENST00000612404 KCNRGQ8N5I3 272 aa13.89□□□□□ -0.19
SREK1-216ENST00000612404 PARP11Q9NR21 331 aa13.89□□□□□ -0.19
SREK1-216ENST00000612404 S100A11P31949 105 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 HTR2BP41595 481 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 OR8G2PQ6IF36 304 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 SMIM3Q9BZL3 60 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 C15orf62A8K5M9 175 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 INAFM1C9JVW0 142 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 OR8U8P0C7N1 319 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 NPY1RP25929 384 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 SULT1A1P50225 295 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 TMEM14EPQ6UXP3 125 aa13.88□□□□□ -0.19
SREK1-216ENST00000612404 BSCL2Q96G97 398 aaPredicted RBP13.88□□□□□ -0.19
SREK1-216ENST00000612404 KANTRA0A1W2PQU2 76 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 BLCAPP62952 87 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 BAXQ07812 192 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 TUSC1Q2TAM9 212 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 FBXO7Q9Y3I1 522 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 NF1P21359 2839 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 INS-IGF2F8WCM5 200 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 IFNA4P05014 189 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 RAB11AP62491 216 aa13.87□□□□□ -0.19
SREK1-216ENST00000612404 MAST4O15021 2626 aa13.86□□□□□ -0.19
SREK1-216ENST00000612404 LINC01548A6NM66 108 aa13.86□□□□□ -0.19
SREK1-216ENST00000612404 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
SREK1-216ENST00000612404 C4BPBP20851 252 aa13.86□□□□□ -0.19
SREK1-216ENST00000612404 HSD17B13Q7Z5P4 300 aaPredicted RBP13.86□□□□□ -0.19
SREK1-216ENST00000612404 LFNGQ8NES3 379 aa13.86□□□□□ -0.19
SREK1-216ENST00000612404 OR5C1Q8NGR4 320 aa13.86□□□□□ -0.19
SREK1-216ENST00000612404 TMEM170AQ8WVE7 144 aa13.86□□□□□ -0.19
SREK1-216ENST00000612404 SRSF8Q9BRL6 282 aaKnown RBP13.86□□□□□ -0.19
SREK1-216ENST00000612404 FBXL17Q9UF56 701 aa13.86□□□□□ -0.19
SREK1-216ENST00000612404 CUBNO60494 3623 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 RNASE2P10153 161 aaKnown RBP13.85□□□□□ -0.19
SREK1-216ENST00000612404 HBG1P69891 147 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 HBG2P69892 147 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 CLINT1Q14677 625 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 OPCMLQ14982 345 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 ETV3LQ6ZN32 361 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 C19orf35Q6ZS72 473 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 P2RX4Q99571 388 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 ARPC5LQ9BPX5 153 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 BCL2L11O43521 198 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 EGR2P11161 476 aaPredicted RBP13.85□□□□□ -0.19
SREK1-216ENST00000612404 SUB1P53999 127 aaKnown RBP eCLIP13.85□□□□□ -0.19
SREK1-216ENST00000612404 ARL16Q0P5N6 197 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 ECSCRQ19T08 205 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 BSXQ3C1V8 233 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 HAPLN4Q86UW8 402 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 OR1S2Q8NGQ3 325 aa13.85□□□□□ -0.19
SREK1-216ENST00000612404 DNAJC9-AS1A6NH13 148 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 C2orf83Q53S99 150 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 LILRB2Q8N423 598 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 TMEM86BQ8N661 226 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 OR10P1Q8NGE3 313 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 SGMS2Q8NHU3 365 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 DEFA4P12838 97 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 SLC38A11Q08AI6 406 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 ASPHD1Q5U4P2 390 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 Q6ZS46 218 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 SLC35E3Q7Z769 313 aa13.84□□□□□ -0.19
SREK1-216ENST00000612404 ATP5IP56385 69 aaPredicted RBP13.83□□□□□ -0.2
SREK1-216ENST00000612404 UNQ5815/PRO19632Q6UWF5 114 aa13.83□□□□□ -0.2
SREK1-216ENST00000612404 ZNF418Q8TF45 676 aaPredicted RBP13.83□□□□□ -0.2
SREK1-216ENST00000612404 ZNF471Q9BX82 626 aaPredicted RBP13.83□□□□□ -0.2
SREK1-216ENST00000612404 LINC00527Q9UJ94 153 aa13.83□□□□□ -0.2
SREK1-216ENST00000612404 PMS2P5A8MQ11 134 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 TAAR5O14804 337 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 IGHG2P01859 326 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 OR5T1Q8NG75 326 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 PINX1Q96BK5 328 aaKnown RBP13.82□□□□□ -0.2
SREK1-216ENST00000612404 WNT10AQ9GZT5 417 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 ESM1Q9NQ30 184 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 F11RQ9Y624 299 aaKnown RBP13.82□□□□□ -0.2
SREK1-216ENST00000612404 CTRB1P17538 263 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 CTRB2Q6GPI1 263 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 ZNF114Q8NC26 417 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 OR1P1Q8NH06 330 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 NPFFR1Q9GZQ6 430 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 WFDC1Q9HC57 220 aa13.82□□□□□ -0.2
SREK1-216ENST00000612404 FN1P02751 2386 aaKnown RBP13.82□□□□□ -0.2
SREK1-216ENST00000612404 G3V318 75 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 TRIM77I1YAP6 450 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 ARSJQ5FYB0 599 aaPredicted RBP13.81□□□□□ -0.2
SREK1-216ENST00000612404 SLC25A24Q6NUK1 477 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 STPG2Q8N412 459 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 TTC9CQ8N5M4 171 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 MISP3Q96FF7 219 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 NIPBLQ6KC79 2804 aaeCLIP13.81□□□□□ -0.2
SREK1-216ENST00000612404 NPIPB5A8MRT5 1133 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 FBXO24O75426 580 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
SREK1-216ENST00000612404 PRH1P02810 166 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 MFAP2P55001 183 aa13.81□□□□□ -0.2
SREK1-216ENST00000612404 RPL7L1Q6DKI1 246 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms