RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 LINC00271P0C7V0 271 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 TAS2R60P59551 318 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 IL36BQ9NZH7 164 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 IGHV1-18A0A0C4DH31 117 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 ZNF385CQ66K41 422 aaPredicted RBP13.12□□□□□ -0.31
TNXB-208ENST00000611016 TEX45Q8NA69 505 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 DMRT1Q9Y5R6 373 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 LTBP1Q14766 1721 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 A0A087WWC5 75 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 LOC107984156A0A0G2JMH3 177 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 FAM90A9PA6NNJ1 464 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 SCGB1A1P11684 91 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 ARL17AQ8IVW1 177 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 TMEM183AQ8IXX5 376 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 KLK15Q9H2R5 256 aa13.12□□□□□ -0.31
TNXB-208ENST00000611016 CEACAM4O75871 244 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 FOXF2Q12947 444 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 MEIG1Q5JSS6 88 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 SDHCQ99643 169 aaPredicted RBP13.11□□□□□ -0.31
TNXB-208ENST00000611016 PDCD11Q14690 1871 aaKnown RBP13.11□□□□□ -0.31
TNXB-208ENST00000611016 TRBV20OR9-2A0A075B6H5 130 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 TFF1P04155 84 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 PLP1P60201 277 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 PLPPR1Q8TBJ4 325 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 RCC1LQ96I51 464 aaKnown RBP13.11□□□□□ -0.31
TNXB-208ENST00000611016 MRPL13Q9BYD1 178 aaKnown RBP13.11□□□□□ -0.31
TNXB-208ENST00000611016 A0A1B0GTI1 187 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 MSGN1A6NI15 193 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 NBEAP1P0C6P0 100 aa13.11□□□□□ -0.31
TNXB-208ENST00000611016 LOC105371267A0A1B0GV96 52 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 OR11H12B2RN74 326 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 SIGLEC5O15389 551 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
TNXB-208ENST00000611016 VDAC2P45880 294 aaPredicted RBP13.1□□□□□ -0.31
TNXB-208ENST00000611016 OR11H1Q8NG94 326 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 OR11H2Q8NH07 326 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 MDC1Q14676 2089 aaKnown RBP13.1□□□□□ -0.31
TNXB-208ENST00000611016 OTOFQ9HC10 1997 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 SOD3P08294 240 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 DDTP30046 118 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 NPFFR1Q9GZQ6 430 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 SCN5AQ14524 2016 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 SHISA3A0PJX4 238 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 IGFBP2P18065 325 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 PRELID3AQ96N28 172 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 WNT10AQ9GZT5 417 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 A0A0G2JMZ2 1700 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 LRRC37A2A6NM11 1700 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 H3BRM9 83 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 PEX7O00628 323 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 TCF21O43680 179 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 C2orf88Q9BSF0 95 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 CHD5Q8TDI0 1954 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 H7C2G1 150 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 CD24P25063 80 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 NEUROG1Q92886 237 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 ZNF318Q5VUA4 2279 aa13.1□□□□□ -0.31
TNXB-208ENST00000611016 CCL1P22362 96 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 FHITP49789 147 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 WDR82Q6UXN9 313 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 HINT1P49773 126 aaPredicted RBP13.09□□□□□ -0.31
TNXB-208ENST00000611016 LCTP09848 1927 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 YPEL1O60688 119 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 GHRHP01286 108 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 PVRIGQ6DKI7 326 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 YPEL2Q96QA6 119 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 METRNQ9UJH8 293 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 MPZP25189 248 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 SLC50A1Q9BRV3 221 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 TNFRSF18Q9Y5U5 241 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 SAA2-SAA4A0A096LPE2 208 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 NBR2O15453 112 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 SAA2P0DJI9 122 aaPredicted RBP13.09□□□□□ -0.31
TNXB-208ENST00000611016 DMRTA2Q96SC8 542 aa13.09□□□□□ -0.31
TNXB-208ENST00000611016 ZNF646O15015 1829 aaPredicted RBP13.08□□□□□ -0.31
TNXB-208ENST00000611016 MYOD1P15172 320 aa13.08□□□□□ -0.31
TNXB-208ENST00000611016 DUX3Q96PT4 197 aa13.08□□□□□ -0.31
TNXB-208ENST00000611016 OTORQ9NRC9 128 aa13.08□□□□□ -0.31
TNXB-208ENST00000611016 GNLYP22749 145 aa13.08□□□□□ -0.32
TNXB-208ENST00000611016 JMJD8Q96S16 334 aa13.08□□□□□ -0.32
TNXB-208ENST00000611016 RPP21Q9H633 154 aaKnown RBP13.08□□□□□ -0.32
TNXB-208ENST00000611016 EGR1P18146 543 aa13.08□□□□□ -0.32
TNXB-208ENST00000611016 EFNB1P98172 346 aa13.08□□□□□ -0.32
TNXB-208ENST00000611016 SRSF7Q16629 238 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNXB-208ENST00000611016 LYZL4Q96KX0 146 aa13.08□□□□□ -0.32
TNXB-208ENST00000611016 PRSS22Q9GZN4 317 aa13.08□□□□□ -0.32
TNXB-208ENST00000611016 TMEM133Q9H2Q1 129 aa13.08□□□□□ -0.32
TNXB-208ENST00000611016 TFF3Q07654 80 aa13.08□□□□□ -0.32
TNXB-208ENST00000611016 TRBV6-7A0A0A0MS04 114 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 A0A1B0GUT8 65 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 UNQ6494/PRO21346Q6UXR6 183 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 TNFRSF14Q92956 283 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 EMP1P54849 157 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 Q5BKY6 102 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 OR52E5Q8NH55 327 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 RPRMQ9NS64 109 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 STAG3L3P0CL85 134 aa13.07□□□□□ -0.32
TNXB-208ENST00000611016 SMIM13P0DJ93 91 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms