RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TMEM164Q5U3C3 297 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 FAM214BQ7L5A3 538 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 TSKUQ8WUA8 353 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 CHRDL1Q9BU40 450 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 RNASE7Q9H1E1 156 aaKnown RBP18.35■□□□□ 0.53
SHANK2-220ENST00000608988 HCFC1P51610 2035 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 DIDO1Q9BTC0 2240 aaKnown RBP18.35■□□□□ 0.53
SHANK2-220ENST00000608988 IGKV1D-17A0A075B6S4 117 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 CGB3P0DN86 165 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 CGB7P0DN87 165 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 ZNF134P52741 427 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 ARG2P78540 354 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 PRCDQ00LT1 54 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 GUSBP1Q15486 140 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 Q6ZN92 141 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 DNAJC4Q9NNZ3 241 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 FOXJ2Q9P0K8 574 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 DUSP13Q9UII6 198 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 OR51B2Q9Y5P1 312 aa18.35■□□□□ 0.53
SHANK2-220ENST00000608988 MMDQ15546 238 aa18.34■□□□□ 0.53
SHANK2-220ENST00000608988 TMEM30BQ3MIR4 351 aa18.34■□□□□ 0.53
SHANK2-220ENST00000608988 C2orf83Q53S99 150 aa18.34■□□□□ 0.53
SHANK2-220ENST00000608988 DMRTA1Q5VZB9 504 aa18.34■□□□□ 0.53
SHANK2-220ENST00000608988 ZNF503Q96F45 646 aa18.34■□□□□ 0.53
SHANK2-220ENST00000608988 RCHY1Q96PM5 261 aa18.34■□□□□ 0.53
SHANK2-220ENST00000608988 GGTLC3B5MD39 225 aa18.33■□□□□ 0.53
SHANK2-220ENST00000608988 ACTL6BO94805 426 aa18.33■□□□□ 0.53
SHANK2-220ENST00000608988 C8orf88P0DMB2 117 aa18.33■□□□□ 0.53
SHANK2-220ENST00000608988 KLF5Q13887 457 aaPredicted RBP18.33■□□□□ 0.53
SHANK2-220ENST00000608988 STUMQ69YW2 141 aa18.33■□□□□ 0.53
SHANK2-220ENST00000608988 TMEM105Q8N8V8 129 aa18.33■□□□□ 0.53
SHANK2-220ENST00000608988 TMEM178AQ8NBL3 297 aa18.33■□□□□ 0.53
SHANK2-220ENST00000608988 USF1P22415 310 aaPredicted RBP18.33■□□□□ 0.52
SHANK2-220ENST00000608988 OR7C2O60412 319 aa18.32■□□□□ 0.52
SHANK2-220ENST00000608988 IGLV1-44P01699 117 aa18.32■□□□□ 0.52
SHANK2-220ENST00000608988 HOXA4Q00056 320 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-220ENST00000608988 FAM162BQ5T6X4 162 aa18.32■□□□□ 0.52
SHANK2-220ENST00000608988 OR1L8Q8NGR8 309 aa18.32■□□□□ 0.52
SHANK2-220ENST00000608988 TET2Q6N021 2002 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-220ENST00000608988 CECR9P0C854 216 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 FXYD3Q14802 87 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 KIAA1644Q3SXP7 199 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 J3QR06 171 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 UPK2O00526 184 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 LAMTOR5O43504 91 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 TFPI2P48307 235 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 FABP6P51161 128 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 STPG4Q8N801 248 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 C18orf32Q8TCD1 76 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 MBD6Q96DN6 1003 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 GRAMD2BQ96HH9 432 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 OR2V2Q96R30 315 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 SLC25A33Q9BSK2 321 aa18.31■□□□□ 0.52
SHANK2-220ENST00000608988 SAA2P0DJI9 122 aaPredicted RBP18.3■□□□□ 0.52
SHANK2-220ENST00000608988 RNFT1Q5M7Z0 435 aa18.3■□□□□ 0.52
SHANK2-220ENST00000608988 MRPL54Q6P161 138 aaKnown RBP18.3■□□□□ 0.52
SHANK2-220ENST00000608988 FAM169BQ8N8A8 192 aa18.3■□□□□ 0.52
SHANK2-220ENST00000608988 NDUFB8O95169 186 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 MGST1P10620 155 aaKnown RBP18.29■□□□□ 0.52
SHANK2-220ENST00000608988 TCL1AP56279 114 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 CT45A1Q5HYN5 189 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 OR2D3Q8NGH3 330 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 CT45A3Q8NHU0 189 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 CACNG8Q8WXS5 425 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 PLPPR2Q96GM1 343 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 ZNF714Q96N38 554 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 SAP30LQ9HAJ7 183 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 GCM1Q9NP62 436 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 BET1LQ9NYM9 111 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 TCF21O43680 179 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 SPINK4O60575 86 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 OR2J3O76001 311 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 AGFG2O95081 481 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 TOMM40O96008 361 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 TSPOP30536 169 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 C17orf58Q2M2W7 97 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 SERTAD4Q9NUC0 356 aa18.29■□□□□ 0.52
SHANK2-220ENST00000608988 TRAV9-2A0A087WT02 112 aa18.28■□□□□ 0.52
SHANK2-220ENST00000608988 IGHV2-26A0A0B4J1V2 119 aa18.28■□□□□ 0.52
SHANK2-220ENST00000608988 IGHV2OR16-5A0A0B4J2B6 119 aa18.28■□□□□ 0.52
SHANK2-220ENST00000608988 KBTBD11-OT1A0A1B0GTJ5 212 aa18.28■□□□□ 0.52
SHANK2-220ENST00000608988 IGHG3P01860 377 aa18.28■□□□□ 0.52
SHANK2-220ENST00000608988 KLF3P57682 345 aaPredicted RBP18.28■□□□□ 0.52
SHANK2-220ENST00000608988 TBR1Q16650 682 aa18.28■□□□□ 0.52
SHANK2-220ENST00000608988 OR2Z1Q8NG97 314 aa18.28■□□□□ 0.52
SHANK2-220ENST00000608988 C1orf229Q6ZS94 237 aaPredicted RBP18.27■□□□□ 0.52
SHANK2-220ENST00000608988 ATP5L2Q7Z4Y8 100 aa18.27■□□□□ 0.52
SHANK2-220ENST00000608988 TRIB1Q96RU8 372 aa18.27■□□□□ 0.52
SHANK2-220ENST00000608988 ASCL3Q9NQ33 180 aa18.27■□□□□ 0.52
SHANK2-220ENST00000608988 AHRRA9YTQ3 701 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 CD69Q07108 199 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 DEFB123Q8N688 67 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 OR8B3Q8NGG8 313 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 SMIM12Q96EX1 92 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 OR8B2Q96RD0 313 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 HINT2Q9BX68 163 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 CLEC7AQ9BXN2 247 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 LINC00574Q9H8X3 128 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 FZR1Q9UM11 496 aa18.26■□□□□ 0.51
SHANK2-220ENST00000608988 DNAJC13O75165 2243 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms