RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 ZNF2Q9BSG1 426 aaPredicted RBP11.03□□□□□ -0.64
SSBP4-214ENST00000607020 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
SSBP4-214ENST00000607020 FAT2Q9NYQ8 4349 aa11.03□□□□□ -0.64
SSBP4-214ENST00000607020 DYNC1H1Q14204 4646 aaKnown RBP11.03□□□□□ -0.64
SSBP4-214ENST00000607020 A0A1B0GW64 132 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 E7EUB6 86 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 CD3DP04234 171 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 TBPP20226 339 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 RPL27AP46776 148 aaKnown RBP11.02□□□□□ -0.65
SSBP4-214ENST00000607020 RBMS2Q15434 407 aaKnown RBP11.02□□□□□ -0.65
SSBP4-214ENST00000607020 OR6F1Q8NGZ6 308 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 VSTM2AQ8TAG5 236 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 TMEM167AQ8TBQ9 72 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 MOB3AQ96BX8 217 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 ZNF436Q9C0F3 470 aaPredicted RBP11.02□□□□□ -0.65
SSBP4-214ENST00000607020 SLC5A7Q9GZV3 580 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 CCL28Q9NRJ3 127 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 UBQLN2Q9UHD9 624 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 APLNQ9ULZ1 77 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 V9GYH0 126 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 DNAH11Q96DT5 4516 aa11.02□□□□□ -0.65
SSBP4-214ENST00000607020 IGLV11-55A0A075B6I3 123 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 M0QYG6 137 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 GSTZ1O43708 216 aaPredicted RBP11.01□□□□□ -0.65
SSBP4-214ENST00000607020 AREGP15514 252 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 TAS2R19P59542 299 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 NANOS2P60321 138 aaKnown RBP11.01□□□□□ -0.65
SSBP4-214ENST00000607020 TSPAN5P62079 268 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 EIF4EBP1Q13541 118 aaPredicted RBP11.01□□□□□ -0.65
SSBP4-214ENST00000607020 RNASE10Q5GAN6 216 aaKnown RBP11.01□□□□□ -0.65
SSBP4-214ENST00000607020 LAMTOR1Q6IAA8 161 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 ZNF66Q6ZN08 573 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 KCTD9Q7L273 389 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 CCDC190Q86UF4 302 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 PUSL1Q8N0Z8 303 aaKnown RBP11.01□□□□□ -0.65
SSBP4-214ENST00000607020 TMEM229BQ8NBD8 167 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 ZBTB34Q8NCN2 500 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 OR2A7Q96R45 310 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 HSD17B10Q99714 261 aaKnown RBP11.01□□□□□ -0.65
SSBP4-214ENST00000607020 RARRES2Q99969 163 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 FXYD6Q9H0Q3 95 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 CSTL1Q9H114 145 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 TAS2R8Q9NYW2 309 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 PRELID3BQ9Y3B1 194 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 S4R3C0 116 aa11.01□□□□□ -0.65
SSBP4-214ENST00000607020 PKHD1P08F94 4074 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 DNAH2Q9P225 4427 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 MFSD2BA6NFX1 497 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 FCGR3BO75015 233 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 KBTBD11O94819 623 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 CD74P04233 296 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 RPL35AP18077 110 aaKnown RBP11□□□□□ -0.65
SSBP4-214ENST00000607020 FCGR2BP31994 310 aaPredicted RBP11□□□□□ -0.65
SSBP4-214ENST00000607020 ADMP35318 185 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 RPL30P62888 115 aaKnown RBP11□□□□□ -0.65
SSBP4-214ENST00000607020 ZNF818PQ6ZRF7 136 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 ARRDC1Q8N5I2 433 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 ZNF502Q8TBZ5 544 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 TCTEX1D2Q8WW35 142 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 BORCS5Q969J3 196 aa11□□□□□ -0.65
SSBP4-214ENST00000607020 OR4C46A6NHA9 309 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 A6NHS1 94 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 MPTX1A8MV57 137 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 TNFSF12O43508 249 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 S1PR2O95136 353 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 PTBP1P26599 531 aaKnown RBP eCLIP10.99□□□□□ -0.65
SSBP4-214ENST00000607020 GNRHRP30968 328 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 ETV6P41212 452 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 STEAP1BQ6NZ63 245 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 MFSD4AQ8N468 514 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 OR4D10Q8NGI6 311 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 TMEM190Q8WZ59 177 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 GPHA2Q96T91 129 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 FBXL17Q9UF56 701 aa10.99□□□□□ -0.65
SSBP4-214ENST00000607020 DNAH17Q9UFH2 4485 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 RAB3DO95716 219 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 CMC4P56277 68 aaPredicted RBP10.98□□□□□ -0.65
SSBP4-214ENST00000607020 ZNF79Q15937 498 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 PYDC2Q56P42 97 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 OR2B11Q5JQS5 317 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 SPANXN2Q5MJ10 180 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 AADACL3Q5VUY0 350 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 PLET1Q6UQ28 207 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 VKORC1L1Q8N0U8 176 aa10.98□□□□□ -0.65
SSBP4-214ENST00000607020 DAZ1Q9NQZ3 744 aaKnown RBP10.98□□□□□ -0.65
SSBP4-214ENST00000607020 ANKRD20A5PA0PJZ0 165 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 C11orf94C9JXX5 98 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 DEFA4P12838 97 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 GPR183P32249 361 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 MFAP2P55001 183 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 UCP3P55916 312 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 BRWD1-AS2P59051 145 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 CATR1Q13166 79 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 MEF2DQ14814 521 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 LPCAT3Q6P1A2 487 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 LHFPL1Q86WI0 220 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 CMTM1Q8IZ96 169 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 OR11H2Q8NH07 326 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 OR4S2Q8NH73 311 aa10.97□□□□□ -0.65
SSBP4-214ENST00000607020 CGB1A6NKQ9 187 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms