RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 PMP2P02689 132 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 ISG15P05161 165 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 OR5G3P0C626 314 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 OCM2P0CE71 109 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 KCNE1P15382 129 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 MYL12AP19105 171 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 RPS4Y1P22090 263 aaKnown RBP0.26□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H1TP22492 207 aaPredicted RBP0.26□□□□□ -2.37
SNORA28-201ENST00000606769 FKBP2P26885 142 aaKnown RBP0.26□□□□□ -2.37
SNORA28-201ENST00000606769 NKX2-5P52952 324 aaPredicted RBP0.26□□□□□ -2.37
SNORA28-201ENST00000606769 RPS20P60866 119 aaKnown RBP0.26□□□□□ -2.37
SNORA28-201ENST00000606769 PLCXD2Q0VAA5 305 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 COTL1Q14019 142 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 IBA57Q5T440 356 aaKnown RBP0.26□□□□□ -2.37
SNORA28-201ENST00000606769 AADACL3Q5VUY0 350 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 LCN15Q6UWW0 184 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 Q6ZS49 121 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 ZNF826PQ6ZT77 177 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 ZNF565Q8N9K5 539 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 TERB2Q8NHR7 220 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 OPTNQ96CV9 577 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 PPP1R2P1Q96PQ5 205 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 ODF3Q96PU9 254 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 DRC3Q9H069 523 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 FGFR1OP2Q9NVK5 253 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 MED9Q9NWA0 146 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 PKIGQ9Y2B9 76 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 SOX21Q9Y651 276 aaPredicted RBP0.26□□□□□ -2.37
SNORA28-201ENST00000606769 TTC21AQ8NDW8 1320 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 ROBO3Q96MS0 1386 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 SNAPC4Q5SXM2 1469 aa0.26□□□□□ -2.37
SNORA28-201ENST00000606769 TNRC6BQ9UPQ9 1833 aaKnown RBP0.26□□□□□ -2.37
SNORA28-201ENST00000606769 NOTCH1P46531 2555 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 TOPBP1Q92547 1522 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 C2orf70A6NJV1 201 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 FABP5P3A8MUU1 101 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 FAAHO00519 579 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 SDCBPO00560 298 aaPredicted RBP0.25□□□□□ -2.37
SNORA28-201ENST00000606769 SLC22A1O15245 554 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 CHP2O43745 196 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 IFNA5P01569 189 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 TPM3P06753 285 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 ASAH2BP0C7U1 165 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 UBBP0CG47 229 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H1EP10412 219 aaKnown RBP0.25□□□□□ -2.37
SNORA28-201ENST00000606769 HAAOP46952 286 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 DEFA1P59665 94 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 TPM4P67936 248 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 LPCAT4Q643R3 524 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 GLT8D1Q68CQ7 371 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 C8orf74Q6P047 294 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 DCXRQ7Z4W1 244 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 MRPL30Q8TCC3 161 aaKnown RBP0.25□□□□□ -2.37
SNORA28-201ENST00000606769 RASSF5Q8WWW0 418 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 C11orf40Q8WZ69 217 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 AQP3Q92482 292 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 YIPF3Q9GZM5 350 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 C11orf68Q9H3H3 251 aaKnown RBP0.25□□□□□ -2.37
SNORA28-201ENST00000606769 FKBP14Q9NWM8 211 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 FBXL12Q9NXK8 326 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 NKIRAS1Q9NYS0 192 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 USE1Q9NZ43 259 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 MRPL27Q9P0M9 148 aaKnown RBP0.25□□□□□ -2.37
SNORA28-201ENST00000606769 ARFGEF3Q5TH69 2177 aa0.25□□□□□ -2.37
SNORA28-201ENST00000606769 NCOA6Q14686 2063 aaPredicted RBP0.25□□□□□ -2.37
SNORA28-201ENST00000606769 MUC5BQ9HC84 5762 aaPredicted RBP0.25□□□□□ -2.37
SNORA28-201ENST00000606769 NEO1Q92859 1461 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 ZFYVE9O95405 1425 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 RP1P56715 2156 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 OR2T1O43869 369 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 NOS1APO75052 506 aaPredicted RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 OR2J2O76002 312 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 APOEP02649 317 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 UCHL3P15374 230 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 SPI1P17947 270 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H2BOP23527 126 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H2BBP33778 126 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 RPL5P46777 297 aaKnown RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 EIF2B2P49770 351 aaKnown RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H2BDP58876 126 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 SNRPD2P62316 118 aaKnown RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H2BCP62807 126 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 CAV1Q03135 178 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 GRK1Q15835 563 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 BATFQ16520 125 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST2H2BEQ16778 126 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 IMPG1Q17R60 797 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 ACOT6Q3I5F7 207 aaPredicted RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 OGFRL1Q5TC84 451 aaPredicted RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 KRTAP19-3Q7Z4W3 81 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 LRRC25Q8N386 305 aaPredicted RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 C12orf45Q8N5I9 185 aaPredicted RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 OR13C4Q8NGS5 318 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 H1FXQ92522 213 aaKnown RBP0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H2BHQ93079 126 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 OBSCN-AS1Q96MR7 158 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 TSPAN32Q96QS1 320 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H2BNQ99877 126 aa0.24□□□□□ -2.37
SNORA28-201ENST00000606769 HIST1H2BMQ99879 126 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms