RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 TMEM140Q9NV12 185 aa8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ELF5Q9UKW6 265 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 F11RQ9Y624 299 aaKnown RBP8.45□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ERICH4A6NGS2 130 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ARL6IP5O75915 188 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CTXN2P0C2S0 81 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TRAPPC2P0DI81 140 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TRAPPC2BP0DI82 140 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 SPP1P10451 314 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 DTYMKP23919 212 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TAS2R31P59538 309 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RPL11P62913 178 aaKnown RBP8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TNP2Q05952 138 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 HSD17B13Q7Z5P4 300 aaPredicted RBP8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 BPIFB6Q8NFQ5 453 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ST8SIA2Q92186 375 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 DGCR14Q96DF8 476 aaKnown RBP8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 HINT2Q9BX68 163 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TMEM14BQ9NUH8 114 aa8.44□□□□□ -1.06
PDLIM1P1-201ENST00000604187 IGHV3-66A0A0C4DH42 116 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 KNCNA6PVL3 124 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ST8SIA3O43173 380 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RBFOX2O43251 390 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CD5P06127 495 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 EIF4EP06730 217 aaKnown RBP8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 NQO2P16083 231 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 NPY1RP25929 384 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CALRP27797 417 aaKnown RBP8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RPS25P62851 125 aaKnown RBP8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 SPHARQ15513 63 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 THOC7Q6I9Y2 204 aaKnown RBP8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ZNF773Q6PK81 442 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TMEM91Q6ZNR0 172 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 LILRB2Q8N423 598 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 UFD1Q92890 307 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 LSM10Q969L4 123 aaKnown RBP8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 S100A14Q9HCY8 104 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RABAC1Q9UI14 185 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 LSM2Q9Y333 95 aaKnown RBP8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 V9GY05 133 aa8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 SRRM2Q9UQ35 2752 aaKnown RBP8.43□□□□□ -1.06
PDLIM1P1-201ENST00000604187 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TEX50A0A1B0GTY4 177 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 SULT1C2O00338 296 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 FGF2P09038 288 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RANBP1P43487 201 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 POU2AF1Q16633 256 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CNIH2Q6PI25 160 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CSNK1G2-AS1Q8NCQ2 148 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 DMBX1Q8NFW5 382 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 SECTM1Q8WVN6 248 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CCL28Q9NRJ3 127 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 FKBP14Q9NWM8 211 aa8.42□□□□□ -1.06
PDLIM1P1-201ENST00000604187 HPRT1P00492 218 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 GNAO1P09471 354 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RNF212Q495C1 297 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ACTL10Q5JWF8 245 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 UBE2UQ5VVX9 321 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 C8orf59Q8N0T1 100 aaPredicted RBP8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 OR1L8Q8NGR8 309 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 NUDCD2Q8WVJ2 157 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 SLC25A46Q96AG3 418 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 GINS3Q9BRX5 216 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 NXF2Q9GZY0 626 aaKnown RBP8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 DCSTAMPQ9H295 470 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 VSIRQ9H7M9 311 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 PLCXD1Q9NUJ7 323 aa8.41□□□□□ -1.06
PDLIM1P1-201ENST00000604187 METTL21EPA6NDL7 271 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 IGHV3-48P01763 117 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ZNF688P0C7X2 276 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 HSMCR30P0CW71 290 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 RAB6AP20340 208 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 EMP1P54849 157 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 OR10A3P58181 314 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ARL6IP1Q15041 203 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 CDNFQ49AH0 187 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 HACD4Q5VWC8 232 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 TOMM20LQ6UXN7 152 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 C10orf67Q8IYJ2 551 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 DHRSXQ8N5I4 330 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 DUSP18Q8NEJ0 188 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 STXBP6Q8NFX7 210 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 OR13F1Q8NGS4 319 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 OR51H1Q8NH63 302 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 MISP3Q96FF7 219 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ATG5Q9H1Y0 275 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 NDUFA4L2Q9NRX3 87 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 ANXA10Q9UJ72 324 aa8.4□□□□□ -1.06
PDLIM1P1-201ENST00000604187 MFAP4P55083 255 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 ERVK-16P61578 105 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 CATR1Q13166 79 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 MSMO1Q15800 293 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 ZNF367Q7RTV3 350 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 OR1P1Q8NH06 330 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 FAM210BQ96KR6 192 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 PLEKHA2Q9HB19 425 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 COMMD9Q9P000 198 aa8.39□□□□□ -1.07
PDLIM1P1-201ENST00000604187 NSG2Q9Y328 171 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms